Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0497 ATGCAAAGAAGCAATGATGTGATGCATCCAGCATGTGCAGCATGCAAACACCAAAGGAAGAAATGCAATGAAAAATGTGTATTAGCCCCTTATTTTCCATCAAGTAGAACTGCTGAGTTTGATGCTGTTCACAAGGTTTTTGGTGTTAGCAACATAACAAAGTTGATAAAGAATGTTGAAGTGGAAGATCAAAGAATGGTTGTGGATTCTTTAATATGGGAAGCATGCTGTAGGCAAAGGGATCCTATACAAGGTGCTTATGGAGAGTTTACAAAAATTTACTACCAGTATAAGAAAGTGTTCAATGAACTTCAGATATTCAAAGGCCAAAACCACCAAATAATGCAATTTCCATCCATCCAAGGATTGAAACCTGTTCAAGATTTCATTGCATTCAATGGGGACAAAGAGAAACACAAAGTAGAAAGAACTGATAATGCTTTAAATTATCTTTCGGCCAACAGAAATAATGTTATTATTGATTCTAACATCTACAATAACAATTGCCCAAATTATTTGCAAGAAATGGAGTTAGAGAATATGAGGTCAGAAGTTGTAACCCCATCATTTCAGCAGCACTCCCAACCATACTATTTTACAGGCATCAATCTCTTTCTTCAAGTTTATATTTCATATTTTGATGAGTTGAGTGTGTGTTTCATTCTATTAAATTCAAACACTCAATAA 687 0.3464 MQRSNDVMHPACAACKHQRKKCNEKCVLAPYFPSSRTAEFDAVHKVFGVSNITKLIKNVEVEDQRMVVDSLIWEACCRQRDPIQGAYGEFTKIYYQYKKVFNELQIFKGQNHQIMQFPSIQGLKPVQDFIAFNGDKEKHKVERTDNALNYLSANRNNVIIDSNIYNNNCPNYLQEMELENMRSEVVTPSFQQHSQPYYFTGINLFLQVYISYFDELSVCFILLNSNTQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0497 228 Pfam Lateral organ boundaries (LOB) domain 11 106 IPR004883 -
Lal2g0497 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 197 - -
Lal2g0497 228 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lal2g0497 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 5 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0497 Lal-Chr2 2993410 2994096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0497 9 196 AS2 family AT1G06280 35.897 1.46e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal2g0497 LOB 1.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0497 - - lang:109351853 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0497 2 2993410 2994096 Lal9g0447 9 2945447 2946013 LSH