Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0489 ATGATGCAAGAAAAGATGGATGATGGAGAAGTTTCAAATGGTTTCCCTCAGAACCCAACAACTGATCCTGAAGCTGAAATCATAGCCTTATCACCAAAGACACTAATGGCAACAAACAGGTTCTTATGTGAAACATGTGGGAAGGGTTTCCAAAGGGATCAAAATCTTCAACTGCATAGACGTGGACACAACCTACCGTGGAAGCTTAAACAGAGAACAAGCAAAGAAATAAGGAAGCGAGTTTATGTATGTCCAGAGAAAACTTGTGTCCACCACAACCCAGCGAGGGCTCTGGGAGACTTAACTGGGATAAAAAAGCACTTTTGCAGGAAGCACGGGGAGAAGAAATGGAAGTGTGATAAGTGTTCAAAGCGTTATGCAGTGCAATCAGATTGGAAAGCACACTCAAAGACCTGTGGTACCAGAGAATATAAATGTGATTGTGGAACTATCTTTTCGAGGAGGGATAGCTTCATCACTCATAGGGCCTTCTGTGATGCCTTGGCAGAAGAAACAGCTAGGGTAAATGCAACATCAAACATAAGCAACTCACTAGGCCCTAACTTTAGTTACAACATCATGGGAACTCCCCAAGGCCCTAACGTGGCCACCCATTTTTCTTCAATATTCGAGCCAGTTTCAAGTACTGGTCATGAAACTAGTACTCAAACCACTAGAGGGCTATCCCTTTGGATGGACGAACTATCTCATCAGGCTCATGAAACAATGGTCGATGAAAATATTCACCAACTTGGGTCAGCCACAAGCTCAGGGCCAGCAATATATGATGGTAACAATTACCCGCTAGTCCAATACTCAAATATTCCTCCACCCTCTAATAATTATCGGCTAAATTGGATTTTTGGAACTAAACCTTCCTCTAATAGTAGCCAGGAGCTTATAACTAGCACTACTAGTTCACTCCCACTAGTCAATTTTATTAAGGATGCTACGTGTACAAGCCAGCTTATAAGTGTTCCTTCCTTGTATAGCTCCCAACACCAATCCTACCAAACATCATCAGCAACAAACATGTCAGCCACAGCTTTGTTGCAGAAAGCTGCTCAAATTGGTGCAACCTCAACTCATGACTCATCATTCCTTGGGAGCTTAGGTTTGAAATGCAGTGACAGCCAAGTTCAAGATGGGAACAGATTTTGTCTGACGTATGGTTCAAGTTCAGTACTCACTAGTCTTGGGAGTGATGCAGATAATTCTGCATGCGACTTGTCACAAATGCACCCTGCAAAACGTAGACATGTACAGAATGAGGATGGTTCTGGTGGGGGGCAAACTCGGGATTTTCTTGGTGTTGGGATGCAAACTATTTGCCACCCTACATCCATCAATGGATGGATATAA 1362 0.431 MMQEKMDDGEVSNGFPQNPTTDPEAEIIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEKTCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNATSNISNSLGPNFSYNIMGTPQGPNVATHFSSIFEPVSSTGHETSTQTTRGLSLWMDELSHQAHETMVDENIHQLGSATSSGPAIYDGNNYPLVQYSNIPPPSNNYRLNWIFGTKPSSNSSQELITSTTSSLPLVNFIKDATCTSQLISVPSLYSSQHQSYQTSSATNMSATALLQKAAQIGATSTHDSSFLGSLGLKCSDSQVQDGNRFCLTYGSSSVLTSLGSDADNSACDLSQMHPAKRRHVQNEDGSGGGQTRDFLGVGMQTICHPTSINGWI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0489 453 Gene3D Classic Zinc Finger 95 175 - -
Lal2g0489 453 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 63 IPR013087 -
Lal2g0489 453 PANTHER F-BOX ASSOCIATED PROTEIN 20 450 - -
Lal2g0489 453 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 450 - -
Lal2g0489 453 SUPERFAMILY beta-beta-alpha zinc fingers 40 137 IPR036236 -
Lal2g0489 453 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Lal2g0489 453 MobiDBLite consensus disorder prediction 1 23 - -
Lal2g0489 453 Gene3D Classic Zinc Finger 18 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0489 Lal-Chr2 2950271 2952461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0489 17 453 IDZ Gene Family AT1G03840 51.724 3.05e-145 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal2g0489 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0489 K25870 - qsu:112011855 615.92