Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0488 ATGATCAAGTGCAGTGACCCTGAAAACAATAACATGATAGTGGAGGGACGAAAAGATAGCTTAATTAGAGCTTGTCCTACTTGTGCTCATCATATCAAATGCCAAGACCAGGGTGGTGGAATTCATGACTTGCCTGGGCTACCTGCTGGAGTGAAGTTTGATCCCACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAGGTGAGGGATGATATTCATAAGCTTCACCCATTAATTGATGAGTTCATCCCTACTCTTGAAGGAGAGAATGGAATCTGCTATACTCATCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGCCTGATACGCCATTTCTTTCACCGACCTTCAAAGGCATATACAACTGGGACAAGGAAAAGGAGAAAGGTACATTCAGAAGAAGATGGTAGTGAAACTCGTTGGCACAAAACAGGTAAGACAAGACCAGTGTATATCAGTGCCAAGTTAAAAGGTTACAAGAAAATTCTTGTACTTTACACTAACTATGGAAAGCAAAAAAAGCAAGAGAAAACAAATTGGGTAATGCATCAATACCACCTTGGAAGTAATGAAGAGGAGAAAGAAGGGGAGTTAGTGGTCTCCAAAGTTTTCTACCAAACACAACCCAGACAATGTGGTAATAATAATTCACTGATGAAAGATTCAGTTTCTGCTAAAATAATGAAGGGTCAAAGTGTGCATGATGAGGTAATCAATAACAACAAAAACAATGGGTTTGTTGATTACTACAATTCAAATTTCATATCATTTGGTCAAGGAGGACAACATAGATCAAGCAATGAAGTCATTTCTCATTTTCCTGGACATGGTGGTGCTCCTTTCATTCCAAAGAAGTAG 858 0.3928 MIKCSDPENNNMIVEGRKDSLIRACPTCAHHIKCQDQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRDDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSEEDGSETRWHKTGKTRPVYISAKLKGYKKILVLYTNYGKQKKQEKTNWVMHQYHLGSNEEEKEGELVVSKVFYQTQPRQCGNNNSLMKDSVSAKIMKGQSVHDEVINNNKNNGFVDYYNSNFISFGQGGQHRSSNEVISHFPGHGGAPFIPKK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0488 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 282 IPR044799 GO:0003700
Lal2g0488 285 ProSiteProfiles NAC domain profile. 47 206 IPR003441 GO:0003677|GO:0006355
Lal2g0488 285 Gene3D NAC domain 56 210 IPR036093 GO:0003677|GO:0006355
Lal2g0488 285 MobiDBLite consensus disorder prediction 126 141 - -
Lal2g0488 285 MobiDBLite consensus disorder prediction 120 141 - -
Lal2g0488 285 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 282 - -
Lal2g0488 285 Pfam No apical meristem (NAM) protein 48 187 IPR003441 GO:0003677|GO:0006355
Lal2g0488 285 SUPERFAMILY NAC domain 42 206 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0488 Lal-Chr2 2944972 2947547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0488 23 215 NAC Transcription Factor Family AT4G28500 80.412 2.53e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal2g0488 NAM 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0488 - - gmx:100797459 509.605