Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0487 ATGCTCTTCTCCTTTCTCTTCTTCATCTCATTCCTATCTCTTCTCAACCTCTCACTTTCTCTAACACAAGACGGTATTTTCCTCTTAGAAGCCAAACTCCACCTCTCTGACCCTTCTAACTCCCTCTCCTCTTGGAACTCCTCCGACCAAACCCCTTGCAACTGGTACGGCGTCACATGCCACAACACCACCGTCACCGCCGTCAACCTCAACTCCCTCTCCCTCTCCGGCCCCTTCCCCATCTCCCTCTGCCTCCTCCCTTCCCTCACTTCCCTCTCCCTCTCCGACAACTTCATCAACTCCTCCCTCCCCTCCCTTACCCTCCCCAACTGCCGCAACCTCCGCCACCTCGACCTTTCCCAAAATACCCTCGTCGGCCACATCCCACACTCTCTCTCTCGAATCTCTTCACTCCAACACCTTGATCTCTCATTCAACAATCTCTCAGGCCCTATTCCTTCCTCACTCGCCACCCTCCCAAAACTTGAATCACTGATTCTTGTTTATAACTTCCTCACTGGATCCATTCCCGATTCTATTGGTAATATCTCATCACTTAAAGTTCTTCACCTTGCTTATAACCCCTTCACACCGAGTCACTTGCCGAGTCAACTCGCTAACTTGACCAAACTCGAAAGCCTTTGGTGCACGAGCTGCAATCTGGTGGGTTCGATTCCAAGTTCACTTGGTGCACTCGTTAACCTCAAGAATCTTGATCTAGCAGAGAACAACCTTACTGGTACTATTCCTGAATCGTTCTCTGGGTTGAAGAGTGTGACTCAGATTGAGCTCTATTCTAACTCGCTCTCCGGCGAGTTGCCGCTTGGGTTATCGAACTTGACTCAGTTGGAGAGGTTCGATGCTTCGATGAACGAGTTGTCTGGGACCATTCCTGAAGGGTTGTGTGGATTGAAACTCGCCTCACTGAATTTGTTTAACAACAAGCTCGAAGGGTCGTTGCCGGAGGTAATAGCGAGTTCGCCCAACCTCTACGAGCTTAAATTGTTCAACAATAACCTTGTTGGCAAGTTGCCGAGTAATTTGGGAAGGAATTCGCCTTTCAATCAGATTGATGTTTCGTATAATAACTTTTCCGGCAAGATTCCGGCAAGTTTGTGCAATGGGGGACAGTTTGAGGAGCTGATTTTGATTTACAATTCATTTTCCGGGGAAATTCCGGAGAGTTTGGGAAATTGCAAGAGCTTAAGGAGGGTTAGGCTTAGGAATAATAAACTCACTGGAATAGTTCCTGATGGTTTTTGGGGTCTGCCTCATATGTATTTGCTTGAGGTTATAGAAAATTCTTTAACTGGGCATGTTTCTAATTCAATCTCTGGTGCGAAAAACTTGTCATCGCTGTTAATTTCCAAGAACCAGTTTAATGGGTCGATTCCTGATGAAATTGGGTATTTGGATAACCTTTTGGAGTTTGATGGAAGCTATAATAAATTTTCCGGTCAGCTTCCGGATAGTATGGCGAGGTTGAGCCAGTTGGATAATCTTGATCTTAGTCACAATGAATTTTCTGGAGAAATTCCGGGTGGAATTTTTCGTGATTGGACTCAGCTCAATGATCTTAATTTGGCAAATAATAGGTTTAATGGTAAAATTCCAATTGAGTTAGGAAGCTTGCCTGTACTTAATTATCTTGATCTGTCAAGTAATTACTTTTCTGGTGAAATCCCAAAGCAGCTGCAAAATTTGAAGCTGAATGTGTTGAATTTGTCAAACAATCAGCTTTCTGGGGACATTCCTCCCCTTTTTGCCAATGAGAATTATAGGATGAGTTTTGAAGGAAATCCTGGTCTCTGTGGTGATTTACCTGGGCTCTGTCCAAGCTCTGGTGAGAGTAAGAAACGGAAGTGTGCTTGGATTTTCAGTTCTATATTTGTGCTTGCTGGGGTTTTGTTTGTAGTTGGGGTCGGCTGGTTTTATTTGAAATGTAGGAACATGAAGAAGTTGAAGAAGGGGTTTAACATTTCGAAGTGGAGGTCATTTCACAAGCTGGGTTTTAACGAGTTTGAGATTGTGAAATTGCTGAGTGAAGACAATGTGATAGGGAGTGGAGCATCTGGAAAGGTATACAAGGCAGTACTTAGCAATGGTGAGGTGGTGGCAGTGAAGAAATTGTGGGGGGCAACTAATAAATTCAATGGAGTTGTTAGTTCTGAAAAAGATGGATTTGAGGCTGAAGTTGAAACACTAGGAAATATTAGGCACAAGAATATTGTGAGGTTGTGGTGTTGCTGCAACAGTGGTGATAGTAAGCTCCTTGTTTATGAGTATATGCCAAATGGGAGCTTGGGTGATATGTTGAAGAGTAGCAAGAAAAGCTTGTTGGATTGGCCTATTAGGTATAAAATTGCTATTGATGCTGCTGAGGGGCTTGCTTATTTGCATCATGATTGTGCTCCTCCCATTGTTCATAGGGACGTAAAATCTAACAATATATTGCTGGATGGAGAGTTTGGTGCAAAAGTTGCAGATTTTGGAGTTGCCAAAGTTGTTGGAGGAGTTGGCCCTGGGGCAGAATCCATGTCCGTGGTTGCAGGATCTTATGGTTACATTGCACCAGAATATGCATATACTCTTCGGGTGAACGAAAAGAGTGATATTTACAGCTTCGGCGTGGTGATTTTAGAATTGGTAACCGGAAAACCCCCCATTGATCCAGAGTATGGGGAAAGTGATCTGGTAAAATGGGTGTCTTCCACATTAGAACAGAAAGGACTGAACTATGTGATTGATCCTACTTTGGATTCCAAATACACTGAAGTAATAAGCAAGGTGCTTAGTGTGGGGCTTATTTGTACTAGTTCTCTTCCTATAACTCGTCCTGCAATGAGAAGGGTAGTGAAAATGCTTCAGGAAGCAACAACAGCTCCCAAATCCACAAGTGTTAAGGATGGAAAACTCTCCCCTTATTACTATGAAGAGGCCTATCTTCATCAAGGAAGTGTGGCTTGA 2967 0.4385 MLFSFLFFISFLSLLNLSLSLTQDGIFLLEAKLHLSDPSNSLSSWNSSDQTPCNWYGVTCHNTTVTAVNLNSLSLSGPFPISLCLLPSLTSLSLSDNFINSSLPSLTLPNCRNLRHLDLSQNTLVGHIPHSLSRISSLQHLDLSFNNLSGPIPSSLATLPKLESLILVYNFLTGSIPDSIGNISSLKVLHLAYNPFTPSHLPSQLANLTKLESLWCTSCNLVGSIPSSLGALVNLKNLDLAENNLTGTIPESFSGLKSVTQIELYSNSLSGELPLGLSNLTQLERFDASMNELSGTIPEGLCGLKLASLNLFNNKLEGSLPEVIASSPNLYELKLFNNNLVGKLPSNLGRNSPFNQIDVSYNNFSGKIPASLCNGGQFEELILIYNSFSGEIPESLGNCKSLRRVRLRNNKLTGIVPDGFWGLPHMYLLEVIENSLTGHVSNSISGAKNLSSLLISKNQFNGSIPDEIGYLDNLLEFDGSYNKFSGQLPDSMARLSQLDNLDLSHNEFSGEIPGGIFRDWTQLNDLNLANNRFNGKIPIELGSLPVLNYLDLSSNYFSGEIPKQLQNLKLNVLNLSNNQLSGDIPPLFANENYRMSFEGNPGLCGDLPGLCPSSGESKKRKCAWIFSSIFVLAGVLFVVGVGWFYLKCRNMKKLKKGFNISKWRSFHKLGFNEFEIVKLLSEDNVIGSGASGKVYKAVLSNGEVVAVKKLWGATNKFNGVVSSEKDGFEAEVETLGNIRHKNIVRLWCCCNSGDSKLLVYEYMPNGSLGDMLKSSKKSLLDWPIRYKIAIDAAEGLAYLHHDCAPPIVHRDVKSNNILLDGEFGAKVADFGVAKVVGGVGPGAESMSVVAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPIDPEYGESDLVKWVSSTLEQKGLNYVIDPTLDSKYTEVISKVLSVGLICTSSLPITRPAMRRVVKMLQEATTAPKSTSVKDGKLSPYYYEEAYLHQGSVA 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0487 988 Gene3D Phosphorylase Kinase; domain 1 661 762 - -
Lal2g0487 988 SMART serkin_6 680 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0487 988 ProSiteProfiles Protein kinase domain profile. 680 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0487 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Lal2g0487 988 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Lal2g0487 988 Gene3D Transferase(Phosphotransferase) domain 1 763 974 - -
Lal2g0487 988 SUPERFAMILY L domain-like 39 368 - -
Lal2g0487 988 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 1 980 - -
Lal2g0487 988 Pfam Leucine rich repeat 401 460 IPR001611 GO:0005515
Lal2g0487 988 Pfam Leucine rich repeat 87 148 IPR001611 GO:0005515
Lal2g0487 988 Pfam Leucine rich repeat 234 293 IPR001611 GO:0005515
Lal2g0487 988 Gene3D Ribonuclease Inhibitor 26 133 IPR032675 -
Lal2g0487 988 Gene3D Ribonuclease Inhibitor 134 201 IPR032675 -
Lal2g0487 988 SUPERFAMILY Protein kinase-like (PK-like) 680 955 IPR011009 -
Lal2g0487 988 SUPERFAMILY L domain-like 357 605 - -
Lal2g0487 988 SMART LRR_typ_2 399 422 IPR003591 -
Lal2g0487 988 SMART LRR_typ_2 280 304 IPR003591 -
Lal2g0487 988 SMART LRR_typ_2 232 255 IPR003591 -
Lal2g0487 988 SMART LRR_typ_2 86 110 IPR003591 -
Lal2g0487 988 SMART LRR_typ_2 183 208 IPR003591 -
Lal2g0487 988 SMART LRR_typ_2 495 519 IPR003591 -
Lal2g0487 988 SMART LRR_typ_2 135 159 IPR003591 -
Lal2g0487 988 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Lal2g0487 988 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 980 - -
Lal2g0487 988 Gene3D Ribonuclease Inhibitor 202 305 IPR032675 -
Lal2g0487 988 Gene3D Ribonuclease Inhibitor 306 614 IPR032675 -
Lal2g0487 988 ProSiteProfiles Leucine-rich repeat profile. 569 591 IPR001611 GO:0005515
Lal2g0487 988 Pfam Protein kinase domain 682 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0487 Lal-Chr2 2940171 2943665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0487 19 988 Receptor kinase-like Gene Family AT1G28440 59.980 0.0 1156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal2g0487 Pkinase 5.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0487 - - ccaj:109805711 1253.43