Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0481 ATGCGAAACCCAATTTCATCCTCAATGGCTGTGAAGGAGAGAAAGTGTGAGAAAAACAATGACAAACCTAACAACAACGTTATTGAGCCTCATTTCCGCGGCGTACGGAAGCGACCATGGGGTCGTTACGCCGCTGAGATCAGAGATCCTGGCAAGAAAAGCCGTGTCTGGCTCGGAACATTTGACACCGCCGAGGAAGCTGCTAGAGCCTACGACAAAGCTGCCACACAGTTCCGTGGTCCAAAGGCCAAAACCAACTTCCCTTCTGAACTCAACAACAACGAAAACCGTCAAAACAATAACAACCGTAGCCCTAGCCAGAGCAGCACCGTCGAATCCCCCACCCCGGAGCGTGAGATCACGCCTCGTCGTGACATCAATATGGATCGTTTTCCGTTTCTTCCTCTGCAGCCGCCGCAGCCGCAGATCATGGCTTTCGGATGTGGAGCTGCTGCGGTTGAGGGTATGTTAACTGCTGCACCCGTGAACCCGGTTTTCTTTATGGGTCAGCGTTTTCCTGTCCGGTTCGAACCGGTTCCTGTTGTGTTTAACAATGGATTTGGCGGTGGGGCCCAGAGTGACTCAGATTCATCCTCTGTCGTTGATTGTCAGCGACCAAAGCGAATTCTCAATCTTGATCTTAACCTCGCTCCACCCATGGATTATTGA 669 0.5157 MRNPISSSMAVKERKCEKNNDKPNNNVIEPHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDKAATQFRGPKAKTNFPSELNNNENRQNNNNRSPSQSSTVESPTPEREITPRRDINMDRFPFLPLQPPQPQIMAFGCGAAAVEGMLTAAPVNPVFFMGQRFPVRFEPVPVVFNNGFGGGAQSDSDSSSVVDCQRPKRILNLDLNLAPPMDY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0481 222 Pfam AP2 domain 30 80 IPR001471 GO:0003700|GO:0006355
Lal2g0481 222 PANTHER ERF DOMAIN PROTEIN 9-RELATED 20 206 - -
Lal2g0481 222 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Lal2g0481 222 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Lal2g0481 222 CDD AP2 30 88 IPR001471 GO:0003700|GO:0006355
Lal2g0481 222 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 206 - -
Lal2g0481 222 MobiDBLite consensus disorder prediction 77 125 - -
Lal2g0481 222 MobiDBLite consensus disorder prediction 82 116 - -
Lal2g0481 222 Gene3D AP2/ERF domain 31 89 IPR036955 GO:0003700|GO:0006355
Lal2g0481 222 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Lal2g0481 222 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Lal2g0481 222 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677
Lal2g0481 222 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0481 Lal-Chr2 2916134 2916802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0481 29 220 AP2-EREBP Transcription Factor Family AT5G44210 44.898 4.26e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lal2g0481 AP2 1.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0481 K09286 - gmx:100801924 182.185