Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0478 ATGGCTTCAACTTCATCTTTCTTCATTACTTTAGTGTTATTCCTATTTTTTCTGCATCTCTCTTGTTTCTTCAACAACCTTAATGCAAAGCACATTCTAACCAAAAATCACAGCCACCAGCACCAACACACCAAGAATCCTTCATCAAATCCAAGGCTTTACAGTGCTTTTCTTGCGCTGCAAGCATGGAAGCGTGTGATATACTCTGACCCTAATAACTTCACCACCAATTGGATAGGTCCTTCAGTTTGCACCTATCATGGTGTCTATTGTGCTCCATCTGTAGATGACCCTAAAGTCACAGTTGTGGCTGGCATTGACCTTAACTTTGGTGACATAGCAGGGTTCCTGCCCAATGAATTAGGTCTGCTTTCTGATCTAGCACTCCTCCATCTAAATAGCAACCGCTTCTGTGGCATCGTCCCTATAGCCTTCAAAAATCTTACACTACTCTATGAGCTTGATCTTAGCAACAATAGATTTGTTGGACCTTTTCCTTCTGTTGTGCTTTCCCTTCCTAGCCTCAGCTATCTTGACATCCGCTACAACGAATTTGAAGGGCCACTGCCTCCTCAACTTTTCAACAAAACTTTAGATGCAATTTTTGTTAATAACAATCGCTTCAGCAGTTCTATTCCTTCAAATTTTGGCCAAAGCAAAGCTAGTGTCCTTGTCTTTGCTAATAACAAACTTGGAGGGTGTCTACCAGAAAGCATAGTTAACTTTGCTGATACATTGGAAGAACTTGTGTTAATCAACACAATTATATCAGGTTGTCTACCACAGCAAGTTGGATCTCTCTACAAATTGAGAGTGCTTGATGTGAGTTTCAACCAAATTGTTGGCCCTATACCTTATAGCCTTGCAGGGTTGTCTCATTTGGAACAACTAAATTTAGCACATAATGAGATGAGTGGCATAGTCCCTAGTGGAGTTTGTGAGTTACCAAGCTTGGCAAATTTCACATTCTCTTATAACTTCTTCTGTGAGGAAGAGGGAATTTGTCAGAACCTGACATCAAAGAGAATCGTGTTTGATGATCGCCGCAACTGTTTGACAGAGAAGCCATTGCAAAGGAGCACAAAAGAATGCAATGCCATACTTGAGCATCCAGTTGATTGCTTTGAGCTTTGTTGTCCTAAAGATGGTGGCTTTGGGACCAATGTCACTGCTGGCTCAGTGGCTATTCCAACTGCTTCAATTCCAGCACCAATGCCTGTTTCTGCACCTCTTCTTGCACCAAGCTACCCTTGA 1254 0.4179 MASTSSFFITLVLFLFFLHLSCFFNNLNAKHILTKNHSHQHQHTKNPSSNPRLYSAFLALQAWKRVIYSDPNNFTTNWIGPSVCTYHGVYCAPSVDDPKVTVVAGIDLNFGDIAGFLPNELGLLSDLALLHLNSNRFCGIVPIAFKNLTLLYELDLSNNRFVGPFPSVVLSLPSLSYLDIRYNEFEGPLPPQLFNKTLDAIFVNNNRFSSSIPSNFGQSKASVLVFANNKLGGCLPESIVNFADTLEELVLINTIISGCLPQQVGSLYKLRVLDVSFNQIVGPIPYSLAGLSHLEQLNLAHNEMSGIVPSGVCELPSLANFTFSYNFFCEEEGICQNLTSKRIVFDDRRNCLTEKPLQRSTKECNAILEHPVDCFELCCPKDGGFGTNVTAGSVAIPTASIPAPMPVSAPLLAPSYP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0478 417 Pfam Leucine rich repeat 269 326 IPR001611 GO:0005515
Lal2g0478 417 Pfam Leucine rich repeat 127 184 IPR001611 GO:0005515
Lal2g0478 417 PANTHER EXTENSIN-LIKE PROTEIN 2 416 - -
Lal2g0478 417 Gene3D Ribonuclease Inhibitor 221 371 IPR032675 -
Lal2g0478 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 416 - -
Lal2g0478 417 Gene3D Ribonuclease Inhibitor 57 220 IPR032675 -
Lal2g0478 417 SUPERFAMILY L domain-like 55 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0478 Lal-Chr2 2891344 2892597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0478 49 381 Leucine-rich Repeat extension Gene Families AT3G24480 56.587 5.73e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0478 - - gmx:100782629 645.58