Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0473 ATGGGTTGCATATGTTCTAAGAGTTCAGCTGTGGAAGACAGCAATGAAGGAATCACAAATAAATTGTCATCATCTAGCAAAAGGTCCTTAGAGTTGAACTCTTTGCGATTGAATTCCTCAAAAAGGGTTGAGGCAGTTCGGGTGAAAGATAAGGTATTAAATAGTCAAAGCAGTGATGTGAAAGTTTCATTAGTTAACAAGAAAGACAACGGTTCAGTGAAATTGTATGAGGTCCAAAATGGGATGAATAAAATAGAGAAACCTGGATTGGCTGTTATTGATCATCCTAGTTTTGGAAGGATTCCAAAGGCTGTTGAAGGAGAGCAAGTTGCAGCAGGATGGCCGGCTTGGCTTTCTTCTGTTGCCGGTGAGGCTATCAAGGGATGGATACCTAGGAGTGCCAACACTTTTGAGAGGTTACATAAAATTGGGCAAGGAACTTATAGCACCGTTTATAAAGCACGTGACGTAACTAACCAAAAGATTGTTGCTTTGAAGAGGATACGCTTTGATAATCTTGATCCCGAGAGTGTCAAATTTATGGCAAGGGAGATCCATGTTCTGCGTAAGCTCGACCATCCAAACATAATAAAGTTGGAGGGCTTGATAACGTCACCGACATCTCGCAGCTTGTACCTTATTTTTGAGTATATGGAACATGATCTTACAGGACTTGCATCAAATCCTGCCGTTAAGTTCTCTGAACCTCAGCTGAAATGCTATATGCAGCAACTTCTTAGTGGACTGAATCATTGTCACAGTCATGGTGTCCTCCATCGTGACATAAAAGGATCAAATCTTCTCATTGACAATAACGGTGTCTTGAAAATTGCCGATTTTGGTTTGGCAAGTTATTTTGACCCCCATCACAGTGTTCCACTGACAAGCCGTGTAGTAACTCTGTGGTATAGACCACCAGAACTTTTACTTGGAGCAAATCATTATGGAGTTGCAGTGGATTTGTGGAGCACTGGTTGCATACTGGGTGAACTATATACTGGCAGACCCATATTACCAGGAAAAACGGAGGTTGAGCAGTTGCATCGGATTTTTAAACTTTGTGGTTCACCATCTGAGGATTATTGGCATAAATTGCGGTTGCCACGTTCAAGTATATTCAAGCCTGCACACCACTATAGGCGGTGTGTTGCGGAAACATTCAAGGAATATCCATCTCCTGCTGTGATTCTTATAGAGACCCTCCTTTCTGTAGATCCAGCACATCGAGGGACCGCAGCTGCTGCTTTGAAAAGTGAGTTCTTTACATCAGAACCCATGGCTTGTGATCCATCAAGTTTACCAAAATATCCTCCTAGCAAAGAGATTGACGCCAAATTGCTGGATGAAGCAACCAGAAGACAAGGAACGGTTGGAAGTAGAGAGCAAAAAGTTGGCTCAGTAGTTAGACAAGATAAAGGAACCAGGACACATGTCACAGCAGCTGACCGAGGCATGTCAATACAGCGTGAGCAACGTTATTCCAGCTCCAAGAACCTAAGTGAATTATCCAAACATCATAGAGAACCTGTGTCTGGATTTCTGGGTTTCCCTCCTCAGAAACGGTTAGAAGATGCTAAAGATATGGGAAATAATTTATCTGGTCGTCGGTATAAAAGGCCTTCACATTCAGGTCCATTGGTTCCTGGTTATAACTTGGCAATGAGTGGAAAGGAAGTTGATGAAGGCGCTCCTGTTTCAAACAGGGTGAACCTATCCAAACTATCTGGCCTAGTGGCATCTAGGACTACTTCATCTCAAGATCAGGAGGAAAAACCAGTTCAGTTGCACCACAGAAAACCAATTGAAGTAAGAAAATCTGTGGAGTCAACTAGTGGATCAGAATCAAGACGGCATGATCAAAAATGGATTGCTGATCTCACTCAAATTGAAAGTGGAAGGGTTCCTAATGAAAAAGTAACTTCGGTAGTGGCAACAGATGGTTTTATTCAATCTGATCTTCAAGAAGCTAATAATGATGGGCATGGGCCCAGGGGAAACAAGATATATATGTCAGGCCCATTACTGGTTCAATCCAGCAACATGGATATGATGCTGAAAGAGCATGATAGAAAGATCCAGGAGTTTTCAAGAAAAGCTAGAATTGACAAGTCTAGAGCAAGAGGTTACAAAGTTCGTTCACAGCCAAAGGAGGAGTAG 2157 0.4228 MGCICSKSSAVEDSNEGITNKLSSSSKRSLELNSLRLNSSKRVEAVRVKDKVLNSQSSDVKVSLVNKKDNGSVKLYEVQNGMNKIEKPGLAVIDHPSFGRIPKAVEGEQVAAGWPAWLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSTVYKARDVTNQKIVALKRIRFDNLDPESVKFMAREIHVLRKLDHPNIIKLEGLITSPTSRSLYLIFEYMEHDLTGLASNPAVKFSEPQLKCYMQQLLSGLNHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASYFDPHHSVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWHKLRLPRSSIFKPAHHYRRCVAETFKEYPSPAVILIETLLSVDPAHRGTAAAALKSEFFTSEPMACDPSSLPKYPPSKEIDAKLLDEATRRQGTVGSREQKVGSVVRQDKGTRTHVTAADRGMSIQREQRYSSSKNLSELSKHHREPVSGFLGFPPQKRLEDAKDMGNNLSGRRYKRPSHSGPLVPGYNLAMSGKEVDEGAPVSNRVNLSKLSGLVASRTTSSQDQEEKPVQLHHRKPIEVRKSVESTSGSESRRHDQKWIADLTQIESGRVPNEKVTSVVATDGFIQSDLQEANNDGHGPRGNKIYMSGPLLVQSSNMDMMLKEHDRKIQEFSRKARIDKSRARGYKVRSQPKEE 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0473 718 PANTHER CELL DIVISION PROTEIN KINASE 1 703 - -
Lal2g0473 718 Gene3D Phosphorylase Kinase; domain 1 124 219 - -
Lal2g0473 718 SMART serkin_6 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0473 718 MobiDBLite consensus disorder prediction 590 619 - -
Lal2g0473 718 MobiDBLite consensus disorder prediction 578 619 - -
Lal2g0473 718 Gene3D Transferase(Phosphotransferase) domain 1 220 460 - -
Lal2g0473 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Lal2g0473 718 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Lal2g0473 718 CDD STKc_CDK9_like 137 421 - -
Lal2g0473 718 ProSiteProfiles Protein kinase domain profile. 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0473 718 MobiDBLite consensus disorder prediction 694 718 - -
Lal2g0473 718 SUPERFAMILY Protein kinase-like (PK-like) 131 427 IPR011009 -
Lal2g0473 718 MobiDBLite consensus disorder prediction 453 523 - -
Lal2g0473 718 Pfam Protein kinase domain 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0473 718 PANTHER CYCLIN-DEPENDENT KINASE 1 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0473 Lal-Chr2 2862768 2868882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0473 129 464 Core Cell Cycle Gene Families AT5G10270 49.432 3.31e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal2g0473 Pkinase 5.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0473 - - gmx:100807590 1012.29