Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0460 GGAGCTTGTGGTTATGGAGAAGAACTCCATAAAGCCAGTTATGGAAAATATAGTGCTGAGTTAAGCAGCATTTTGTTCAGTAGAGAGAGTGCTTGTGGGGCTTGCTATGATCAGATATTTATGTCCTCACTCACTTATGGGCTTTCAGAAGATTCCAAAAGAGCATTTGATATAGTTAAGTGTCAAAGAAGTAGTGGGTTGAAATTCACAATGAGTGGAAGTTCTCACTTCTATCATGTCTTGATCACCAATGTTGGGAACTTGGGATGGATGGTGAAAGTGGTTGTTGTGAAAATGAAGGGATCAAGAACAGGATGGATACCTATAGCAAGGAATTGGGGAAAAATTGGCATTTCAATGTCAACCTTCAACATTAGCCTTTGTCCTTTGAGGTCACTATCAGCAGTTGTTCACACTTCTTCTGAGGTATCCCCTGAGAAGTGGCAGTTTGGACAGACATTTGATGGAAAACAGTTTTAG 480 0.4042 GACGYGEELHKASYGKYSAELSSILFSRESACGACYDQIFMSSLTYGLSEDSKRAFDIVKCQRSSGLKFTMSGSSHFYHVLITNVGNLGWMVKVVVVKMKGSRTGWIPIARNWGKIGISMSTFNISLCPLRSLSAVVHTSSEVSPEKWQFGQTFDGKQF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0460 159 PANTHER EXPANSIN-A15 1 38 IPR002963 GO:0009664
Lal2g0460 159 PANTHER EXPANSIN-A15 56 159 IPR002963 GO:0009664
Lal2g0460 159 Pfam Expansin C-terminal domain 68 115 IPR007117 -
Lal2g0460 159 Gene3D - 1 120 IPR036908 -
Lal2g0460 159 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 76 156 IPR007117 -
Lal2g0460 159 SUPERFAMILY PHL pollen allergen 65 156 IPR036749 -
Lal2g0460 159 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 77 IPR007112 -
Lal2g0460 159 PANTHER EXPANSIN-A20 1 38 - -
Lal2g0460 159 PANTHER EXPANSIN-A20 56 159 - -
Lal2g0460 159 SUPERFAMILY Barwin-like endoglucanases 1 84 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0460 Lal-Chr2 2794840 2795548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0460 1 159 Expansin Gene Family AT4G38210 36.574 1.58e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0460 - - lja:Lj0g3v0263569.1 145.591