Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0455 ATGATGGATGATGCATATAACAAGAGTAGGAAATCTAACAAAGGTGTTCATAAAAGTGAAAGCCCAGATTTTGAGATGGATAAGGGAAAAGGAAAAGGTGTTAGTTTAAGCTCACAGAGGCTACAATGGAATCCAGTTTTTTATGACTCCACCATTTCAACACAAAGGCCTCTTAAGAAGATTTGTAGTCCTGAACGTAACAAAAATCAATCCTCTCTTCAACAACCTCATCCTCCTTCTTCAAGAATAGTATTCCCTTTTGCTCTTGAAGGCTCTCAAACTCAACCTCCAATGCAATTCCCACACCAACCTGGAACCTCAAATTTGTCTCCTTTTCCTCCACCACTTCTTTACCCAACCCAGCAATTCCAGCAACAGCAACAGCAACAAATGATATCTTTTGGTTCACATCACAATATTGGGTATCCACAACAACACCAACAGGTTCAGTATCAGCATCAGCTTCAGTTTTGGAGTGATGCACTGAATTTAAGTCCAAGAGGAAGACCAGTGTTGAGGCCTCAATTACAACATTTGAGTCCTACAAAGCTCTATAGAGGAGTGAGGCAACGCCATTGGGGCAAATGGGTCGCTGAAATTCGCCTTCCTCGCAATAGAACTCGCCTCTGGCTAGGCACATTTAACACCGCTGAAGATGCCGCGATGGCTTATGATCGCGAGGCCTTTAAGCTCAGAGGAGAGAATGCTAGGCTCAATTTCCCTGAACTTTTTCTAAACAAGGTTAAGTCAACTTCAACAACCAAAACAGCTTCAGCTGAAACTTCTATTTCCGCTGTTTCTCAGCCATGTGACGGTTCAACTTCAACACAACTTGAGCCAATTCAAGAAGAAACAGTGAATGTGAACACTGAGGGCGTTCCATCACTGGCACCAATATCAGAAGAGAAGGCTGATAACGATTCAATAGTGACTGGTGAAATCATTTCAGAGTCTCAGGAATTGGTTTGGGGAGATATGGCTGCATGGTTCAATGCAGGTTGGGATAATTTCGACACTAACAATAATCTTCCTTTGGAGACACAGTTTCCTTTTGTGAACCCAAATCACCAAGAACTCAACGATCCTGATGCTGATAAGAGGCAAGAATATAACACAGGAACCGGTTCTTCATCTTCCTCTTCTCCCATGATGCCCTTCTTCTGGAAGGGTCAAAATTGA 1179 0.4266 MMDDAYNKSRKSNKGVHKSESPDFEMDKGKGKGVSLSSQRLQWNPVFYDSTISTQRPLKKICSPERNKNQSSLQQPHPPSSRIVFPFALEGSQTQPPMQFPHQPGTSNLSPFPPPLLYPTQQFQQQQQQQMISFGSHHNIGYPQQHQQVQYQHQLQFWSDALNLSPRGRPVLRPQLQHLSPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFNTAEDAAMAYDREAFKLRGENARLNFPELFLNKVKSTSTTKTASAETSISAVSQPCDGSTSTQLEPIQEETVNVNTEGVPSLAPISEEKADNDSIVTGEIISESQELVWGDMAAWFNAGWDNFDTNNNLPLETQFPFVNPNHQELNDPDADKRQEYNTGTGSSSSSSPMMPFFWKGQN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0455 392 MobiDBLite consensus disorder prediction 369 392 - -
Lal2g0455 392 ProSiteProfiles AP2/ERF domain profile. 184 241 IPR001471 GO:0003700|GO:0006355
Lal2g0455 392 MobiDBLite consensus disorder prediction 1 30 - -
Lal2g0455 392 MobiDBLite consensus disorder prediction 1 37 - -
Lal2g0455 392 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 7 389 - -
Lal2g0455 392 Gene3D AP2/ERF domain 184 242 IPR036955 GO:0003700|GO:0006355
Lal2g0455 392 SMART rav1_2 184 247 IPR001471 GO:0003700|GO:0006355
Lal2g0455 392 SUPERFAMILY DNA-binding domain 184 242 IPR016177 GO:0003677
Lal2g0455 392 PRINTS Ethylene responsive element binding protein signature 185 196 IPR001471 GO:0003700|GO:0006355
Lal2g0455 392 PRINTS Ethylene responsive element binding protein signature 207 223 IPR001471 GO:0003700|GO:0006355
Lal2g0455 392 MobiDBLite consensus disorder prediction 255 276 - -
Lal2g0455 392 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 7 389 - -
Lal2g0455 392 CDD AP2 183 243 IPR001471 GO:0003700|GO:0006355
Lal2g0455 392 Pfam AP2 domain 185 233 IPR001471 GO:0003700|GO:0006355
Lal2g0455 392 MobiDBLite consensus disorder prediction 350 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0455 Lal-Chr2 2772584 2773762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0455 112 285 AP2-EREBP Transcription Factor Family AT2G20880 52.764 6.98e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal2g0455 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0455 - - lang:109352524 570.852