Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0451 ATGGGGTGTTGTGTCTCAACAAGCAGCAGGAGTACTTGTAGCAGCAGGAGCAATGGAGAAAAGGTCTCTCCATCTTGCTTAGAAGTTGGTTGCTGTGGGCAAAAGAGAGCAGCAAGGAGAACCTTCTCTGATCATGTTATTTCTCTACACCATTTACCATCCATATCCAGCAGAATCTTTGCCAACGGAAAGAGCCAGTCTTCTTGCATGTTTACGCAGCAAGGCTGCAAGGGTATTAATCAGGATGCTATGGTTGTTTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGTGGCATCTTTGATGGCCACGGTCCACATGGTCATCTTGTTGCACACAAAGTGAGGGATACCTTGCCATTAAAATTGCTATCATTTTTGCATTCGTCTGAATTGAAATCAAATGGAAATGGATTAGGTAAAGCATGCTTCAAAGGGAACATAGAACCTGATGCCGGAGAATCTGAGAAGGATTGCTTTCCCGAGGATAAACTGACTTCTACATGGAGAGAAGCTTTCATGAAGGCATACAAGGATATGGACAAAGATCTCAGGTCTCATCCTAATTTGGACTGCTTCTGTAGTGGGAGTACATCTGTAACTTTAGTGAAGCAGGGTTCAAATCTGTTCATGGGCAATATTGGGGATTCTCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGCTGACAGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATTAAACACTGTGAGGGTAGAGTATTTGCTTTGCAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGTCTAGAGCATTTGGAGATTTCTGCTTGAAGGACTATGGCGTGATTTCAATACCTGAATTTTCTCACAGGCTGCTCACCAATAGAGATCAATTCATTATTCTTGCCTCAGACGGGGTGTGGGATGTTTTAACCAATGAAGAGGTTGTTGAGATAGTATCTTCAGCCCCAAGACGGTCATCAGCAGCGAGGATTGTGGTAGATTCTGCTGCTCGGGAGTGGAAACTCAAATATCCTACTTCAAAGATGGATGACTGTACTGTTGTGTGCCTATTCTTGGATGGGAAAATGGACTCAGAATCTGAATATGATGAACAAGGCCTTTCCTCTGCAACCATCCAGAGCAACCATTCAGGAGTTAATCCAATTGAGTCAGACGAGGGACAAAAATCTGAGCCATCTTTGCAACGGAACGACACTGTGAGATCCTCAGAAGAGAATGAGACTAATGGAGCATTCTCTGTTGATGTTGAAAATGGAACATCATCAATTGATGATCAAAACTGGCTAGGTTTGGAAGGGGTCACCCGTGTGAACTCACTAGTTCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACTCTTAA 1425 0.433 MGCCVSTSSRSTCSSRSNGEKVSPSCLEVGCCGQKRAARRTFSDHVISLHHLPSISSRIFANGKSQSSCMFTQQGCKGINQDAMVVWEDFMSEDMIFCGIFDGHGPHGHLVAHKVRDTLPLKLLSFLHSSELKSNGNGLGKACFKGNIEPDAGESEKDCFPEDKLTSTWREAFMKAYKDMDKDLRSHPNLDCFCSGSTSVTLVKQGSNLFMGNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKHCEGRVFALQDEPEVHRVWLPFDDAPGLAMSRAFGDFCLKDYGVISIPEFSHRLLTNRDQFIILASDGVWDVLTNEEVVEIVSSAPRRSSAARIVVDSAAREWKLKYPTSKMDDCTVVCLFLDGKMDSESEYDEQGLSSATIQSNHSGVNPIESDEGQKSEPSLQRNDTVRSSEENETNGAFSVDVENGTSSIDDQNWLGLEGVTRVNSLVQLPRFSEERPNS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0451 474 Pfam Protein phosphatase 2C 97 338 IPR001932 -
Lal2g0451 474 Gene3D - 59 381 IPR036457 -
Lal2g0451 474 CDD PP2Cc 66 373 IPR001932 -
Lal2g0451 474 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 462 - -
Lal2g0451 474 SMART PP2C_4 51 371 IPR001932 -
Lal2g0451 474 PANTHER ALPHABET, ISOFORM E-RELATED 1 462 - -
Lal2g0451 474 MobiDBLite consensus disorder prediction 383 447 - -
Lal2g0451 474 MobiDBLite consensus disorder prediction 1 23 - -
Lal2g0451 474 ProSiteProfiles PPM-type phosphatase domain profile. 67 373 IPR001932 -
Lal2g0451 474 MobiDBLite consensus disorder prediction 384 418 - -
Lal2g0451 474 MobiDBLite consensus disorder prediction 1 22 - -
Lal2g0451 474 MobiDBLite consensus disorder prediction 425 447 - -
Lal2g0451 474 SUPERFAMILY PP2C-like 62 375 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0451 Lal-Chr2 2735084 2747659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0451 1 474 PP2C-type Phosphatase Gene Family AT1G03590 66.528 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0451 - - lang:109351819 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0475 1 2981481 2985403 Lal2g0451 2 2735084 2747659 LSH
Lal10g0703 10 14816190 14820101 Lal2g0451 2 2735084 2747659 PCT
Lal8g0799 8 5764289 5768829 Lal2g0451 2 2735084 2747659 PCT
Lal2g0451 2 2735084 2747659 Lal10g0703 10 14816190 14820101 PCT
Lal2g0451 2 2735084 2747659 Lal8g0799 8 5764289 5768829 PCT