Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0446 ATGAAGCAAGTTGTCGGCGCATACAAAGTAACAGCCTGGAAACATGGTGGAGGTGTGGTGGCATACTCAGAGTTACAATCAGAAACTCAACGTCCTACTATTGATGCTATTGAGCCCCCAAAAAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCGGGTACCAGTTTCCTTAAGGGGCTGGATGCTTCATTATATGACGTTCAAGTTGTTTCACCTCGTAACTACTTTGCATTTACTCCCTTACTACCCAGTGTAACTTGTGGAACAGTTGAAGCACGGAGCATTGTAGAGCCAGTCCGAAACATCATAAAAAAGAGAAAAGGAGAAATAAAATTTTGGGAGGCAGAATGTGTGAAGATTGATGCTGTAAACAAAAAGGTGTTTTGCCGGTCTAATATTGAACACTTAGTGGGAAGTGGCGAATTTTCTTTGGAGTATGACTTCTTGGTTGTGGCGGCTGGAGCACAAGTAAATACTTTTAACACCCCTGGTGTCAAGGAGAACTGTTATTTTCTGAAGGATGTCGAGGATGCTCAGAAAATTAGATTGTCTGTGATTGATTGCTTTGAGAAGGCTGTTCTTCCTAGTCTATCTGAAGAAGAGCGAAGGTCAAATCTTCATTTTATAGTTGTTGGAGGAGGTCCAACTGGTGTGGAATTTGCTGCTGAGCTGCATGATTATGTCCTGGAAGATTTAATCAAATTATATCCTACTGTCAAAGATATAGTGAAGATAACATTGATTCAATCAGGAGATCACATCTTGAACACGTTTGACGAAAGAATAAGTTCATTTGCGGAGCAGAAGTTTGGAAGAGACGGTATAGACGTTCAAACAGGAAGTCGTGTTGTCAATGTTAGTGACAAGGAAATTACAGTGAAGGTCAAATCAACAGGAGAGGTTTGCTCTGTGCCCCATGGATTGGTTGTTTGGTCCACTGGCATTTCAACTCTTCCATTTGTGCGGGACTTTATGGAAGAAATTGGTCAGGCCAAACATCGTGTACTAGCAGCTGATGAATGGTTGCGAGTGAAGGGATGTGAAGCTGTGTATGCCCTTGGTGATTGTTGTACAATAAATCAACGTAAAATCATGGACGACATCTCAGACATATTTAAGGCTGCAGACAAAAATAATTCCGGCATCTTAACTATTGAAGAATTCAAGGATGTGATGGGTGATGTCATCTTAAGATATCCGCAAGTTGAACTTTATCTAAAGAAGGAACATCTGCTTGATTTGACCACTCTGTTGAAAGATTCGCAAGGGAACCAAAGAAAAGAAATAGACATAGAAGTGTTTAAGCAGGCCCTTTCTAATGTGGATTCACAGGTGAAGATTCTGCCAGCGACTGCACAGGTTGCTGCCCAACAAGGTGAATATCTAGCTAGATGCTTTAACCACATGAATAAATGTGAAGATCACCCTGAAGGTCCTCGACGATTTAAAGGAACTGGACATCATCAGTTTCGTCCATTCCAGTATAAGCATTTTGGGCAATTTGCTCCTTTGGGTGGGGAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGGTGTTGGTTATATCTGATTGGACAAGAAGATTCATATTTGGGAGGGATTCAAGTGGTGATTTCACAATGCGTTGGTCTTCTTACTACCAGACAGCCTCAAGGATCTTTCATGAGTATCCATCGTGGTCCAAGGCAGTTGTTGTATGCACTGTCATCAGTAGTGGAGGACTAGTGGCATATGGTGATGCCACACCAGTACAAAGTGAATTTGGTAACCAAATCCCCAAAAAGAAGGTGGTGGTGCTTGGAACTGGTTGGTCTGGAACTAGTTTTCTGAAGAATTTGAAAGACCCTTCTTATGAAGTTCATGTGGTTTCACCGCGTAATTATTTTGCTTTCACTCCTTTGCTACCAAGTGTCACGTGTGGTACTGTGGAAGCACGCAGCGTCGTTGAACCTATTCGCAGTATCACCCGCAAGGCCTCTAAGTATGACATGGCTAATGAATTATGCATAATAATGTCTCAACAGAGAGGTGCAAATGTTCAATTTAGTGAAGCTGAATGCTATAAGATCGATCCGAAGAACAACAAAGTTTACTGCCGTGCTGTCCAAGGCAAGAAGCTGGGTAGCGCAGAAGAATTTTCCATTGATTATGATTACCTGGTAATAGCTATGGGAGCCCGTTCTAATACCTTTAACACTCCTGGTGTTCAAGAGCATGCCCACTTTCTCAAGGAAGTTGAAGATGCATTAAGAATCCGACGAACGGTGATTGACCTTTTCGAAAGAGCAAGCCTCCCGTCTTTATCAGTGGACGAGAAGAAAAAACTTCTCAGTTTTGTAGTAGTTGGTGGTGGTCCAACTGGTGTTGAGTTTGCTGCAGAACTTCATGACTTTGTACATGAGGATCTAGCTAAATTATATCCTTCTATTGAAAAATATGTGAAGATTACACTCCTGGAGGCAGGCGATCATATCCTAAACATGTTTGACAAGAGAATTACAGATTTTGCTGAATCAAAGTTCTTCAGAGATGGCATTGATGTGAAGTTGGGCTCTATGGTTGTCAAGGTATCTGAGAATGAAATCTCTTCCAAAGAAAGAACAACTGGTCAAGTTGTTTCTCTACCTCATGGTATGGTAGTTTGGTCCACTGGTATTGGTACTCGCCCTGAAATACTTGATTTTATGAAGCAGATTGGTCAGATTAATAGGCGTGCACTAGTTACTGATGAATGGCTAAGGTTGGAAGGATTTGAGAACATCTATGCTCTAGGTGATTGTGCCACCGTTAATCAGCGGAAAGTTATGGAAGATATAGCCGCGATATTTAGCAAGGCCGACAAGGACAACAACGGAAGGTTGGATCTTAAAGAATTCCGGGAGGTTGTAGGTGACATTATTGAGAGGTACCCCCAAGTAGAGATTTATTTAAAGAAGAACCAAATGAAGGATGTGGCAGACTTGCTACAGAAATCTGAAGAAAGCTCTCTAACAGCAGACATTGAATACTTCAAAGATGCTCTTTCCAAAGTAGATTCTCAGATGAAAAATCTTCCTGCAACAGCTCAGGTGGCTGCTCAACAAGGCGCCTATCTCGCAGATTGTTTCAATCGCATGGAGTTATGTGAGAAGTACCCTGAAGGCCCTATCAGGTTCAGGGGAGTAGGACGCCATCGGTTTCGTCCCTTCAGGTACAAGCATTTGGGACAATTTGCTCCTCTAGGAGGAGAACAAACTGCAGCTATGCTTCCAGGAGATTGGATTTCAATTGGACATAGCTCCCAGTGGCTGTGGTATTCAATATATGCAAGCAAACAAGTCAGCTGGAGAACAAGAATGTTGGTGGTAACTGACTGGACGAGGCGATTCATATTTGGAAGGGACTCGAGTCGAATCTGA 3471 0.427 MKQVVGAYKVTAWKHGGGVVAYSELQSETQRPTIDAIEPPKKKVVVLGTGWAGTSFLKGLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECVKIDAVNKKVFCRSNIEHLVGSGEFSLEYDFLVVAAGAQVNTFNTPGVKENCYFLKDVEDAQKIRLSVIDCFEKAVLPSLSEEERRSNLHFIVVGGGPTGVEFAAELHDYVLEDLIKLYPTVKDIVKITLIQSGDHILNTFDERISSFAEQKFGRDGIDVQTGSRVVNVSDKEITVKVKSTGEVCSVPHGLVVWSTGISTLPFVRDFMEEIGQAKHRVLAADEWLRVKGCEAVYALGDCCTINQRKIMDDISDIFKAADKNNSGILTIEEFKDVMGDVILRYPQVELYLKKEHLLDLTTLLKDSQGNQRKEIDIEVFKQALSNVDSQVKILPATAQVAAQQGEYLARCFNHMNKCEDHPEGPRRFKGTGHHQFRPFQYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVISDWTRRFIFGRDSSGDFTMRWSSYYQTASRIFHEYPSWSKAVVVCTVISSGGLVAYGDATPVQSEFGNQIPKKKVVVLGTGWSGTSFLKNLKDPSYEVHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSITRKASKYDMANELCIIMSQQRGANVQFSEAECYKIDPKNNKVYCRAVQGKKLGSAEEFSIDYDYLVIAMGARSNTFNTPGVQEHAHFLKEVEDALRIRRTVIDLFERASLPSLSVDEKKKLLSFVVVGGGPTGVEFAAELHDFVHEDLAKLYPSIEKYVKITLLEAGDHILNMFDKRITDFAESKFFRDGIDVKLGSMVVKVSENEISSKERTTGQVVSLPHGMVVWSTGIGTRPEILDFMKQIGQINRRALVTDEWLRLEGFENIYALGDCATVNQRKVMEDIAAIFSKADKDNNGRLDLKEFREVVGDIIERYPQVEIYLKKNQMKDVADLLQKSEESSLTADIEYFKDALSKVDSQMKNLPATAQVAAQQGAYLADCFNRMELCEKYPEGPIRFRGVGRHRFRPFRYKHLGQFAPLGGEQTAAMLPGDWISIGHSSQWLWYSIYASKQVSWRTRMLVVTDWTRRFIFGRDSSRI 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0446 1156 Gene3D - 416 562 - -
Lal2g0446 1156 Gene3D - 613 984 - -
Lal2g0446 1156 Gene3D - 1004 1155 - -
Lal2g0446 1156 Gene3D - 32 389 - -
Lal2g0446 1156 SUPERFAMILY FAD/NAD(P)-binding domain 206 360 IPR036188 -
Lal2g0446 1156 ProSitePatterns EF-hand calcium-binding domain. 971 983 IPR018247 -
Lal2g0446 1156 ProSiteProfiles EF-hand calcium-binding domain profile. 363 398 IPR002048 GO:0005509
Lal2g0446 1156 ProSiteProfiles EF-hand calcium-binding domain profile. 958 993 IPR002048 GO:0005509
Lal2g0446 1156 SUPERFAMILY FAD/NAD(P)-binding domain 618 854 IPR036188 -
Lal2g0446 1156 Pfam Pyridine nucleotide-disulphide oxidoreductase 42 363 IPR023753 GO:0016491
Lal2g0446 1156 Pfam Pyridine nucleotide-disulphide oxidoreductase 619 961 IPR023753 GO:0016491
Lal2g0446 1156 SUPERFAMILY EF-hand 365 999 IPR011992 -
Lal2g0446 1156 PANTHER - 7 560 - -
Lal2g0446 1156 PANTHER - 568 1156 - -
Lal2g0446 1156 ProSitePatterns EF-hand calcium-binding domain. 376 388 IPR018247 -
Lal2g0446 1156 SMART efh_1 962 990 IPR002048 GO:0005509
Lal2g0446 1156 SMART efh_1 367 395 IPR002048 GO:0005509
Lal2g0446 1156 PRINTS FAD-dependent pyridine nucleotide reductase signature 621 640 - -
Lal2g0446 1156 PRINTS FAD-dependent pyridine nucleotide reductase signature 741 759 - -
Lal2g0446 1156 PRINTS FAD-dependent pyridine nucleotide reductase signature 802 820 - -
Lal2g0446 1156 PRINTS FAD-dependent pyridine nucleotide reductase signature 930 952 - -
Lal2g0446 1156 SUPERFAMILY FAD/NAD(P)-binding domain 798 955 IPR036188 -
Lal2g0446 1156 Pfam EF hand 370 392 IPR002048 GO:0005509
Lal2g0446 1156 Pfam EF hand 964 987 IPR002048 GO:0005509
Lal2g0446 1156 SUPERFAMILY FAD/NAD(P)-binding domain 41 259 IPR036188 -
Lal2g0446 1156 PANTHER NADH DEHYDROGENASE 7 560 IPR045024 GO:0003954|GO:0006116
Lal2g0446 1156 PANTHER NADH DEHYDROGENASE 568 1156 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0446 Lal-Chr2 2699032 2710337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0446 16 560 Chloroplast and Mitochondria Gene Families AT4G21490 65.091 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0446 K03885 - gmx:100820044 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0480 1 3021222 3025188 Lal2g0446 2 2699032 2710337 LSH