Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0440 ATGGTTAGAACTCCTTATTGTGACAAAAGTGGAATGAGGAAAGGTACTTGGACCTCTGAAGAAGACAAGAAGTTAATTGCCTATGTTACTAGATATGGCTGCTGGAATTGGCGCCAACTCCCCAAGTTTGCTGGTCTGCAAAGGTGTGGGAAGAGTTGTAGATTGAGGTGGTTGAATTATCTGAGGCCTAATATCAAAAGAGGGAATTTCACTAAAGAAGAAGAAGAGATTATTATCAGATTGCACAATAAGCTGGGCAATAGATGGTCTATCATTGCCACTCATTTACAAGGAAGAACAGACAATGAAATAAAGAATTATTGGCATACCTCACTCAAAAAGATTTCTCAACAAACCAATGTCACAAATGAAAATTCCAAAGCCTCCTCCAAACCAAAAGATAATGAATCCAACCTTGGAAGTTCCTCAGTGCCTAACAATGTTTCAGTTCAAGTTACTCCTCCAACTACCACTTCCCAAATCTCTGGTAGTATCACTAGCTCACTATCCCCACTATCATCTTCAAGTGAATTTTCTTCCATGTCTTGGGGTCATACTAATAGTACCACAAAGTTAATGATTGAAGATGACTTTCCTTTTCTTGATGATGCATTCTGGACAAAATCAGATCTTGCTGATATTTCTTACACTCCTCCAAGTGAAATAGTTCAAGATGATAGTAACACTGTTTTTCAGAGTCTAGATAATACTCAAATCATTGATACATTCTCTCCCCAATATCAATCCTCCAGTAAAAGTATGGTTTTTGAGAGTAACTTTGGTAGCTTTCTTGATGGTGAGACAAAAATAAAAATGGACAATTTTTGGACACAACCATTTGTGCCTGACGTGTGTCATGTTCCTAACCAACTACTGACACCCTTGGAGGCTGAATCTCAATATTATTCTGGGGTAGACTTTTGGGGTCAGAATGATAATGATTGTTATTTATATGAGGGTGAGTTGGATCTAGTATAA 978 0.3773 MVRTPYCDKSGMRKGTWTSEEDKKLIAYVTRYGCWNWRQLPKFAGLQRCGKSCRLRWLNYLRPNIKRGNFTKEEEEIIIRLHNKLGNRWSIIATHLQGRTDNEIKNYWHTSLKKISQQTNVTNENSKASSKPKDNESNLGSSSVPNNVSVQVTPPTTTSQISGSITSSLSPLSSSSEFSSMSWGHTNSTTKLMIEDDFPFLDDAFWTKSDLADISYTPPSEIVQDDSNTVFQSLDNTQIIDTFSPQYQSSSKSMVFESNFGSFLDGETKIKMDNFWTQPFVPDVCHVPNQLLTPLEAESQYYSGVDFWGQNDNDCYLYEGELDLV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0440 325 Gene3D - 14 66 - -
Lal2g0440 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lal2g0440 325 CDD SANT 69 112 IPR001005 -
Lal2g0440 325 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 247 - -
Lal2g0440 325 CDD SANT 16 61 IPR001005 -
Lal2g0440 325 MobiDBLite consensus disorder prediction 118 180 - -
Lal2g0440 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lal2g0440 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 247 - -
Lal2g0440 325 Gene3D - 68 140 - -
Lal2g0440 325 SMART sant 66 114 IPR001005 -
Lal2g0440 325 SMART sant 13 63 IPR001005 -
Lal2g0440 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lal2g0440 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lal2g0440 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lal2g0440 325 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Lal2g0440 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0440 Lal-Chr2 2647340 2649045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0440 1 207 MYB Transcription Factor Family AT2G31180 46.667 9.42e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal2g0440 Myb_DNA-binding 1.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0440 K09422 - gmx:778184 315.079