Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0435 ATGAATAAGATATGCGAGCTGTGCAATGTTCCAGCAAGGATCTTCTGTGACTCAGACCAAGCAACCTTATGCTGGGACTGCGACGCTCAAGTACACGCCGCCAACTTCTTAGTGGCTAGGCACTCCAGAACCCTTCTCTGCCACACTTGCTACTCACTCACACCGTGGAAAGCCTCCGGCGCCAGGCTCGGAAACACCGTCTCCTTCTGCCACAATTGCTCCACCGGAGATCAAACTCCAGATACCGTACGAAGGAATGACGGTGGAATGGAAGTTTCCGGTGATTTTCAGCCGGTCCCTTCGTTTTCGACACAACCGCCGGCGCCGGCGAGTTCTGAAGAATCCGTTACCATGTGTACTCATAACGGCAAAAACGGACCTGTTTCTGAATCGGTAACTGCAACAACCTCGTTGAAACGACAACATGAGGATAACGGTCCTTCAGGTCGTGATTAG 456 0.5197 MNKICELCNVPARIFCDSDQATLCWDCDAQVHAANFLVARHSRTLLCHTCYSLTPWKASGARLGNTVSFCHNCSTGDQTPDTVRRNDGGMEVSGDFQPVPSFSTQPPAPASSEESVTMCTHNGKNGPVSESVTATTSLKRQHEDNGPSGRD 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0435 151 PANTHER - 3 145 - -
Lal2g0435 151 CDD Bbox1_BBX-like 4 46 - -
Lal2g0435 151 MobiDBLite consensus disorder prediction 97 142 - -
Lal2g0435 151 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Lal2g0435 151 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 145 - -
Lal2g0435 151 SMART bboxneu5 1 46 IPR000315 GO:0008270
Lal2g0435 151 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Lal2g0435 151 MobiDBLite consensus disorder prediction 80 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0435 Lal-Chr2 2615310 2615765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0435 1 92 C2C2-CO-like Transcription Factor Family AT4G27310 54.639 4.28e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal2g0435 zf-B_box 6.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0435 - - vun:114168631 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0723 10 14968635 14970267 Lal2g0435 2 2615310 2615765 PCT
Lal8g0825 8 5922351 5923651 Lal2g0435 2 2615310 2615765 PCT
Lal2g0435 2 2615310 2615765 Lal10g0723 10 14968635 14970267 PCT
Lal2g0435 2 2615310 2615765 Lal8g0825 8 5922351 5923651 PCT