Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0420 ATGTCTGGTATCGATCGCTCCTCTGGTGATGTTTCAGCTGATTCTAAAGATCAACCCAGCCAAGATCCCAAGGCTGAATTTTCTGATGAAGAGAAAAACCTTATTACCATTTTATATAATCTGGTCGGCGAGAGGTGGTCATTGATTGCTGGAAGAATTCCTGGAAGAACAGCTGAGGAAATAGAGAAGTATTGGAATTCAAGAAATTCTACTGGCGAACGAAGTCGCAATGAATGA 237 0.4135 MSGIDRSSGDVSADSKDQPSQDPKAEFSDEEKNLITILYNLVGERWSLIAGRIPGRTAEEIEKYWNSRNSTGERSRNE 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0420 78 Gene3D - 26 78 - -
Lal2g0420 78 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 13 71 - -
Lal2g0420 78 CDD SANT 26 66 IPR001005 -
Lal2g0420 78 MobiDBLite consensus disorder prediction 1 16 - -
Lal2g0420 78 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 13 71 - -
Lal2g0420 78 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 73 IPR017930 -
Lal2g0420 78 SUPERFAMILY Homeodomain-like 24 68 IPR009057 -
Lal2g0420 78 ProSiteProfiles Myb-like domain profile. 24 69 IPR001005 -
Lal2g0420 78 SMART sant 23 71 IPR001005 -
Lal2g0420 78 Pfam Myb-like DNA-binding domain 26 67 IPR001005 -
Lal2g0420 78 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0420 Lal-Chr2 2516283 2519218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0420 24 68 MYB Transcription Factor Family AT1G22640 53.333 7.45e-13 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal2g0420 Myb_DNA-binding 1.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0420 - - dzi:111287942 108.227