Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0402 ATGGCCAGAGGGAGTGGACTCTCCATGGATTCAGATCCACTTGGGACCTTCTTTCTCCATAAGTTACCAACTGTTCTCAACTCTTTCCCTTCTCATCACGACAACACCAATTGGACACTTAGTCCTAACAACACTAACATGGAGACTACCCTTATCACCTCTTCACCCACACGCGCCACCACCACCACCACCTCCACCTCCACCATCCCCTTCCATGCATCTCCATCTCATGACAAGATCATAGCAACAGAGATGGACTTCTTCTCTGACAAGAACAACAACATCAATGATGACAACGTTGCCTCTGTCCCTGACCATAATCACATACATGATCATTCAAGCACCCCACCTATGTTGGAATTCCATGTAAACACTGGCCTGAATCTTCTTACAACCAACACTAGCAGTGTTCAATCCATGGTGGATAATGATGACGCATCACCAAATTCAGAAGACAACAAAAGAACTAAGAATGAGAAGGGTGTTCTTGAAGCTGAGCTAGAGCGAATGAAGGTTGAGAATGAACGGTTAAGGGAGACGTTTGATGAGGTTAATAGCAATTACAAAGCCCTGCAGATATATTTGGTTAATTTGATGAGGGACCAGAATGGTGGTGGGAAAGTAGAAGAGAGGATGAAAAGGAAGCAAATTGAAAATAATGAGGTATTTGTGCCAAGGAAGTTTATGGATCTTGGTTTGGCTACAAATATTGCGGAGACTGAAATTGAAGAACCATCTTCTTCATCAGGAAATAATAACATAGAGGTAGCTTCTAAGGAGTTAGTCACTACTAGTAAGAATGGAAATGGGAGTAGTAGTGGTAGTGATGAAGGACTAGTGGTTGATAAAGAGAAAAAGGATATTAATAACGGTGGTGGAATTGAAAGTCCTCCAAAAAGTGTTGATCAAGCGGCTGAAGCCACCATGAGGAAGGCAAGAGTTTCTGTTAGAGCTCGATCAGAGGCAACCATGATCACTGATGGGTGTCAATGGAGAAAGTATGGGCAGAAGATGGCTAAAGGAAACCCGTGTCCTCGAGCTTATTACCGCTGCACCATGGCTTCTGGTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAAGACAGGACAGTCCTTATCACAACATATGAAGGCAATCACAATCACCCTTTACCTCCAGCAGCTATGGCAATGGCACAAACCACTTCCTCAGCTACAAGAATGCTGCTTTCAGGATCAATGTCAAGCGCAGATTGCCTAATGAATGCAAACTTTCAAAGTAGGACACTCCTTCCTTGCTCTTCAAGCATAGCATCTATCTCAGCAACTGCTCCTTTTCCAACTGTTACACTGGACCTAACCCATTCTCCAAACCCTCTTCAGTTCTCAAAGCCTTTAAGCCAGTTCCAAATACCATTTCCAGCTCAGAATTTTGCCAACTCCTCAGCCTCATTAATGCCTCAGATATTTGGTCAACCACTCTATAACCAATCAAATTTTTCTGGCCTTCAAATGTCTCAAGATGGATTGGTAAACACTTCACAATTGAGGGATCATCAGGCACCACCACAACACCTTGCTGATACAGTTAGTGCTGCCACTGCAGCCATTGCAGCTGATCCTAACTTCACTGCTGCTTTGGCAGCTGCTATCACTTCCATTATTGGTGCTGGTTCTCAGCTAAACAACAATAGCACTAAAAATAACGATAGCAACAGCAATGGCAATATCACAACTAGCAACAACAATGGAAAGCAATGA 1743 0.4349 MARGSGLSMDSDPLGTFFLHKLPTVLNSFPSHHDNTNWTLSPNNTNMETTLITSSPTRATTTTTSTSTIPFHASPSHDKIIATEMDFFSDKNNNINDDNVASVPDHNHIHDHSSTPPMLEFHVNTGLNLLTTNTSSVQSMVDNDDASPNSEDNKRTKNEKGVLEAELERMKVENERLRETFDEVNSNYKALQIYLVNLMRDQNGGGKVEERMKRKQIENNEVFVPRKFMDLGLATNIAETEIEEPSSSSGNNNIEVASKELVTTSKNGNGSSSGSDEGLVVDKEKKDINNGGGIESPPKSVDQAAEATMRKARVSVRARSEATMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRTVLITTYEGNHNHPLPPAAMAMAQTTSSATRMLLSGSMSSADCLMNANFQSRTLLPCSSSIASISATAPFPTVTLDLTHSPNPLQFSKPLSQFQIPFPAQNFANSSASLMPQIFGQPLYNQSNFSGLQMSQDGLVNTSQLRDHQAPPQHLADTVSAATAAIAADPNFTAALAAAITSIIGAGSQLNNNSTKNNDSNSNGNITTSNNNGKQ 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0402 580 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 67 575 IPR044810 GO:0003700
Lal2g0402 580 MobiDBLite consensus disorder prediction 139 159 - -
Lal2g0402 580 MobiDBLite consensus disorder prediction 556 580 - -
Lal2g0402 580 ProSiteProfiles WRKY domain profile. 320 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g0402 580 MobiDBLite consensus disorder prediction 263 303 - -
Lal2g0402 580 Gene3D WRKY domain 310 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal2g0402 580 PANTHER OS05G0567200 PROTEIN 67 575 - -
Lal2g0402 580 Coils Coil 153 187 - -
Lal2g0402 580 SMART WRKY_cls 325 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g0402 580 Pfam WRKY DNA -binding domain 327 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g0402 580 SUPERFAMILY WRKY DNA-binding domain 318 386 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0402 Lal-Chr2 2418316 2421446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0402 78 549 WRKY Transcription Factor Family AT1G62300 49.281 8.90e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal2g0402 WRKY 4.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0402 - - gmx:100127384 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0502 1 3222229 3227534 Lal2g0402 2 2418316 2421446 LSH
Lal8g0034 8 300547 303484 Lal2g0402 2 2418316 2421446 PCT
Lal2g0402 2 2418316 2421446 Lal8g0034 8 300547 303484 PCT