Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0386 ATGGATGTTGATTCCTCTATGGTGCCGGATTCCGATCACGATCCGGCGCTGCTCAACCATGCCGATTCGACGGATAGGGAGAGCCAAGGGGAGTTGCCTTCAGGCGGAGGATCTCCGTCGACGCCGCAGATTCAACAGCAACCGCCGGTGCTGCAGCAGCAGACGGAGCCTGGTTCTCAGGTGCAGCAGAATCCGGTCGCCGGTCCTAGGCTCGCTCCAACTTACTCTGTGGTGGATGTTATTTTGGAGAAGAAGGAGGATGGGCCGGGGCCGCGGTGTGGCCACACGTTGACGGCAGTGGCGGCTGTCGGAGAAGAAGGCACGCCGGGGTACATTGGTCCTAGGTTGATTTTGTTTGGTGGTGCCACTGCGCTTGAAGGGAACTCTGCTGCTTCAGGGACTCCTTCATCAGCTGGAAATGCTGGCATACGTTTAGCTGGTGCGACAGCTGACGTCCACTGTTATGATGTCTTGAGTAATAAATGGTCTAGGATAGTTCCCTTTGGAGAGCCCCCAACCCCAAGAGCTGCACATGTGGCAACTGCTGTGGGAACGATGGTAGTTATTCAGGGTGGTATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTTACTCAGCAACGGCCACGATGGCATAGAGTTGGTGTTCCAGGCCCTGGACCAGGGCCACGTTATGGACATGTAATGGCTTTGGTAGGGCAGAGATATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCGTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGCCCACCTCCATGCATGTATGCAACTGCAAGTGCCCGCTCTGATGGGCTTCTTCTGCTCTGTGGAGGGAGAGATGCCAATAGTGTTCCATTGGCAAGTGCGTATGGGCTTGCTAAGCATAGAGACGGTCGTTGGGAATGGGCAATTGCCCCTGGTGTATCACCATCTCCGAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGACTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGACGGATGGTAGAAGACTCATCAAGTATTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACTAGTCCAAGAACTGGTAGATACAGTGCTGATGCACCTGGTGGAGATGCCGCAGTTGAGTTGACACGTCGTTGTAGGCATGCTGCTGCTGCTGTTGGCGACTTAATTTTTATCTATGGTGGTTTACGTGGTGGAGTTTTGCTGGATGACCTACTTGTTGCCGAGGATCTTGCTGCTGCTCAAACAACTGCTGCTGCTTCACAAGCTGCTGCTGCAGCAGCTGCGTCTAATGTACAAGTGGGACGACTACCTGGACAATATGGATTTGTTGATGATACGACAAGGCAAACAATACCTGAAGCAGATGCTGATTGTGCAGTTGTTTTGGGCAATCCAGTTGCTCCCCCTGTAAATGGTGACATGTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGGTCTAGGCGAACTAGCAAAGGTGTTGAGTATCTGGTTGAAGCATCAGCTGCTGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCACGACAAGAGAATGGAGAAGATGAGCTGCCTGACAGAGACTGTGGGGCTGAGGCTACCCCTAGTGGGAAGCAAATATCTTCCTTGATTAAGCCTGATTCTGCAGGGCCAAATAACATCACTCCTGGTGGAATTAGGCTACATCATAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCGATTGATCAGTTTGAAAATGAAGGCAGGCGGGTCAGTTATGGGACTCCAGAAAATGCGTCCGCTGCTCGGAAGTTATTAGATCGGCAGATCTCTATCAGTAGTGTTCCAAAGAAGATCATAGCACACCTCTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGCAGGCAGTTTTTCTTAGATTGCAATGAAATTGCCGATCTTTGTGACACTGCAGAGCGGATATTTTCAGGTGAACCAAGCGTCATACAACTTAGGGCACCAATTAAAATATTTGGTGATTTACATGGACAGTTTGGGGATCTTATGCGTCTGTTTGATGAGTATGGTGCACCATCGACTGCTGGTGACATAGCATATATTGATTATCTATTCCTAGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATAAGCCTTCTGCTTGCTCTGAAGGTTGAATATCCAAACAACGTTCATTTAATACGTGGAAACCATGAAGCTGCTGACATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGCGAGAGGGATGGAATTTGGGCATGGCACCGGATAAACCGTCTGTTTAATTGGCTTCCTTTGGCAGCTCTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGTTCTATAAATCATGTGGAACAGATTGAAAATATTCAGCGTCCGATTACGATGGAAGCAGGATCCATAGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGATTGCGGCCAAATGCGAGAGGTCCAGGTTTAGTTACTTTTGGGCCTGATCGTGTAATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGCGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTGATCACTCTTTTCTCAGCTACAAACTACTGTGGTACCGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTTGTTGTTGTTCCTAAGCTGATTCATCCATTACCACCTGCAATTTCTTCACCAGAAACATCACCAGATCACCATATTGAAGATACCTGGATGCAGGAGTTGAATGCTAACAGACCAGCAACACCGACTAGAGGTCGTCCTCAAGTAACAAATGACCGAGGTTCGCTTGCTTGGATATAG 3021 0.4873 MDVDSSMVPDSDHDPALLNHADSTDRESQGELPSGGGSPSTPQIQQQPPVLQQQTEPGSQVQQNPVAGPRLAPTYSVVDVILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLSNKWSRIVPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSIAVLDTAAGVWCDTKSVVTSPRTGRYSADAPGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAQTTAAASQAAAAAAASNVQVGRLPGQYGFVDDTTRQTIPEADADCAVVLGNPVAPPVNGDMYTDISTENAMLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGEDELPDRDCGAEATPSGKQISSLIKPDSAGPNNITPGGIRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENASAARKLLDRQISISSVPKKIIAHLLKPRGWKPPVRRQFFLDCNEIADLCDTAERIFSGEPSVIQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPDHHIEDTWMQELNANRPATPTRGRPQVTNDRGSLAWI 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0386 1006 PIRSF STPPP_BSU1 42 1006 IPR012391 GO:0004721|GO:0009742
Lal2g0386 1006 Gene3D - 72 199 IPR015915 GO:0005515
Lal2g0386 1006 Pfam Calcineurin-like phosphoesterase 703 910 IPR004843 GO:0016787
Lal2g0386 1006 PRINTS Serine/threonine phosphatase family signature 703 730 IPR006186 GO:0016787
Lal2g0386 1006 PRINTS Serine/threonine phosphatase family signature 738 765 IPR006186 GO:0016787
Lal2g0386 1006 PRINTS Serine/threonine phosphatase family signature 771 795 IPR006186 GO:0016787
Lal2g0386 1006 PRINTS Serine/threonine phosphatase family signature 809 835 IPR006186 GO:0016787
Lal2g0386 1006 PRINTS Serine/threonine phosphatase family signature 839 866 IPR006186 GO:0016787
Lal2g0386 1006 PRINTS Serine/threonine phosphatase family signature 899 919 IPR006186 GO:0016787
Lal2g0386 1006 PRINTS Serine/threonine phosphatase family signature 921 937 IPR006186 GO:0016787
Lal2g0386 1006 Gene3D - 200 451 IPR015915 GO:0005515
Lal2g0386 1006 MobiDBLite consensus disorder prediction 1 70 - -
Lal2g0386 1006 Pfam Kelch motif 333 379 IPR011498 GO:0005515
Lal2g0386 1006 Gene3D - 647 980 IPR029052 -
Lal2g0386 1006 Pfam Galactose oxidase, central domain 227 280 - -
Lal2g0386 1006 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1000 - -
Lal2g0386 1006 MobiDBLite consensus disorder prediction 984 1006 - -
Lal2g0386 1006 MobiDBLite consensus disorder prediction 28 69 - -
Lal2g0386 1006 CDD MPP_Bsu1_C 655 957 IPR041758 -
Lal2g0386 1006 SMART pp2a_7 675 959 IPR006186 GO:0016787
Lal2g0386 1006 MobiDBLite consensus disorder prediction 548 588 - -
Lal2g0386 1006 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1000 - -
Lal2g0386 1006 SUPERFAMILY Kelch motif 147 436 IPR015915 GO:0005515
Lal2g0386 1006 ProSitePatterns Serine/threonine specific protein phosphatases signature. 772 777 IPR006186 GO:0016787
Lal2g0386 1006 MobiDBLite consensus disorder prediction 567 581 - -
Lal2g0386 1006 SUPERFAMILY Metallo-dependent phosphatases 659 966 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0386 Lal-Chr2 2320991 2334354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0386 667 902 Calmodulin-binding Proteins AT5G63870 29.412 3.07e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0386 - - gmx:100816091 1757.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0386 2 2320991 2334354 Lal2g0386 2 2320991 2334354 ECH
Lal2g0386 2 2320991 2334354 Lal9g0352 9 2340907 2353381 ECH
Lal2g0386 2 2320991 2334354 Lal9g0352 9 2340907 2353381 LSH
Lal10g1301 10 19033516 19045933 Lal2g0386 2 2320991 2334354 PCT
Lal2g0386 2 2320991 2334354 Lal10g1301 10 19033516 19045933 PCT