Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0383 ATGGCAACGTACTTTCATGGTGGCAGCAGTTCAGAAATCGAATCCTCTGCAGAAGGGTTACAGACACTTTACCTTATGAACCCAAACTACGTACCCTACTCTGACGCGGCGCAACATCCAACACCAAACATGTTCCTCATCAATCCCAACACTGCTTCAACTACTACTACCCACGCGCTCAATCTCGCCAACTTATCCCACGCGCCACCACCTCAATCACCCAACAACAACAACCATAATCATCACCACCAACAACAACACATGATTGGTGTTACCATTCCTTCATCAAACATCATTGGATCCACCAACGCTGATGAAATTTCCGGCTATCCTGGCCTTTCGTCCACGGCTTCTCGTGTCCACTATAACTTGTGGGGTTTTGATCAAAACCCTTCGTCTGCGGCGGCGGTCACTATAGCTGCAACCCCTCCTAACAATTTGGGGTATGCAACCACCGTGACCGCCACCGTTGCCACGGATATTTCACCGCAAGTTGGTTTCAATAGTCCTAATAATCATCGACAAGGGTTGTCTCTTAGCCTTTCTTCTCAACAACCAATTTATAGATCGCTTTCTGGTGAGATATCTCCTGCAATCCGTGGCAGTGGAATCTCAGATATGAATAATAGTAACGTGATTTTGGGGTCCAAGTATTTGAAAGCAGCACAGGAGCTTCTCGATGAAGTTGTGAATGTAGGTAAAGGAATCTTCAAAGGCGAGTCTATTGAAAGTACTGTGAATAGAGAGAAGATGAAAGCGAATATTGAATCAACATCTGGTATTGGTGGTGATGGTTCAAGTGGTGGAGGACAAAACAGTAGAGGCAAACAAGGAGTTGAACTCAGCATGGCACAAAGACAAGAACTTCAAATGAAGAAATCCAAGCTTGTGACCATGCTCGATGAGGTGGAGCAAAGGTACAGACATTATCACCACCAAATGCAAATTGTGATATCATCATTTGAGCAAGTAGCTGGTTATGGTGCAGCAAAATCTTACACAGCACTTGCCTTAAAGACAATCTCAAAGCAATTCCGGTGTCTTAAGGATGCAATATCTTCACAAATAAAGTCAACGAACAAGACCTTAGGTGAAGATGATTGCTTAGGAATCAAGGTTGAAGGTTCAAGGCTTAGGTATGTTGACTATCATCTCCGGCAACAAAGGACATTACAACAACTTGGAATGATTCAACATAATGCTTGGAGGCCCCAAAGAGGATTGCCTGAACGTGCTGTTTCCGTTCTTCGCTCTTGGCTCTTTGAGCACTTCCTTCACCCCTATCCTAAGGACTCGGATAAGGTTATGCTTGCAAAACAAACTGGACTTACTCGGAGCCAGGTGTCTAACTGGTTCATAAATGCCCGAGTTCGGTTATGGAAACCAATGGTTGAAGAAATGTACTTGGAAGAAATCAAAGAACAAGAGCAAAACAATGGCTCCAAGGATAACACAAATAGAGCAAAAGAATCAAGCAAAGAGTTGTGGACATCATCAACAGCTAATAATGCTGTACAAGAATCATCATCACCCAACAATATAAGTCTTGATCAGAATAATGTTCTCCAATCCAAAGCTGAAAGCTTCAACAACAACCAAAACATTTCTCCAACTGAGATCTCCAACTCTAATAATTCCATGGGGGGATCAACCCTTCAATCCCAGTCTGGTAAATTCCATAATGCAGGGTCATCTCATGACATTATGCAAAATAGTAGTCCAAACAAGAGAAGAAATTCTGAAATGCACAACTCTCCAGGTAGTGGTATATTTTCAGTGGACATGGACATGAAGCCTGGAGATACAAATAGAGAAATTTCCAACACAAAGTTTGGCATTGAGAACCATGGTGGTGGCACTGGTGGGGGTTATGGAGCATTTTCTATAGAAGAGATTGGAAGGTTTAATAATGTGGCTGAGCAATTGGCTCCTAGGTTTCATGGAAATGGTGTTTCTCTCACTCTTGGACTTCCACATAATGAGAACTTTCCTCTATCTGGAACACAACATGAGTTTCTCTCACAGAATATACACTTGGGAGGAGTTGGAAGGCTTCATGAGATGGGAACCAATGAAAATGAGTTTTGTGCCATTAACAGTACTCCTCCACCTTCTTTTCATTCCGGAACCAGTTATGAGAATATTGACATTCAAAACAGAAAGAGATTTGCTGCACAGTTATTGAGGGATTTTGTGGCATGA 2202 0.4264 MATYFHGGSSSEIESSAEGLQTLYLMNPNYVPYSDAAQHPTPNMFLINPNTASTTTTHALNLANLSHAPPPQSPNNNNHNHHHQQQHMIGVTIPSSNIIGSTNADEISGYPGLSSTASRVHYNLWGFDQNPSSAAAVTIAATPPNNLGYATTVTATVATDISPQVGFNSPNNHRQGLSLSLSSQQPIYRSLSGEISPAIRGSGISDMNNSNVILGSKYLKAAQELLDEVVNVGKGIFKGESIESTVNREKMKANIESTSGIGGDGSSGGGQNSRGKQGVELSMAQRQELQMKKSKLVTMLDEVEQRYRHYHHQMQIVISSFEQVAGYGAAKSYTALALKTISKQFRCLKDAISSQIKSTNKTLGEDDCLGIKVEGSRLRYVDYHLRQQRTLQQLGMIQHNAWRPQRGLPERAVSVLRSWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEQNNGSKDNTNRAKESSKELWTSSTANNAVQESSSPNNISLDQNNVLQSKAESFNNNQNISPTEISNSNNSMGGSTLQSQSGKFHNAGSSHDIMQNSSPNKRRNSEMHNSPGSGIFSVDMDMKPGDTNREISNTKFGIENHGGGTGGGYGAFSIEEIGRFNNVAEQLAPRFHGNGVSLTLGLPHNENFPLSGTQHEFLSQNIHLGGVGRLHEMGTNENEFCAINSTPPPSFHSGTSYENIDIQNRKRFAAQLLRDFVA 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0383 733 Gene3D - 405 485 - -
Lal2g0383 733 MobiDBLite consensus disorder prediction 481 516 - -
Lal2g0383 733 Pfam Homeobox KN domain 419 458 IPR008422 GO:0003677|GO:0006355
Lal2g0383 733 SMART prehox3 207 354 IPR006563 -
Lal2g0383 733 MobiDBLite consensus disorder prediction 531 587 - -
Lal2g0383 733 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 8 677 - -
Lal2g0383 733 ProSiteProfiles 'Homeobox' domain profile. 399 462 IPR001356 GO:0003677
Lal2g0383 733 Coils Coil 286 306 - -
Lal2g0383 733 MobiDBLite consensus disorder prediction 256 278 - -
Lal2g0383 733 CDD homeodomain 402 463 IPR001356 GO:0003677
Lal2g0383 733 Pfam Associated with HOX 212 353 IPR006563 -
Lal2g0383 733 SUPERFAMILY Homeodomain-like 403 468 IPR009057 -
Lal2g0383 733 MobiDBLite consensus disorder prediction 531 593 - -
Lal2g0383 733 MobiDBLite consensus disorder prediction 474 516 - -
Lal2g0383 733 SMART HOX_1 402 466 IPR001356 GO:0003677
Lal2g0383 733 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 8 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0383 Lal-Chr2 2290802 2296300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0383 1 733 Homeobox Transcription Factor Family AT2G35940 42.728 3.56e-135 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lal2g0383 POX 6.9e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0383 - - gmx:100786883 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0383 2 2290802 2296300 Lal2g0383 2 2290802 2296300 ECH
Lal2g0383 2 2290802 2296300 Lal9g0347 9 2305622 2311012 LSH