Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0374 ATGTCTTCCAACAAGAAAGGTTTTCTAAGAACCGTGTTCACATCAAATGGAAGTTGTGGCTGTGGCAAAGCAAAACCATTTGAAGTACACGAGCCTATCCCTAAATCTAAATTCTCCATTCATCATAACCAAAACACAAACCCAAGCTGCATGAGTTCTTCAACCACCACTTCCGGTGATTGCAACGGTGGTGTTTCCTCCATGGAGAACGAAGAATTCACCTCCGCCGCCACCTCTGAACCCGACACAGCAATCACACATGATCTTGATCATAAAAACAACAACGACAACGTCGTACTAAAAAGGAGTCCTCTAATGGACAGTGTAGCAATTGAGAAGAACTCTTCGGATCCGTACCATGATTTCAGGCACTCCATGCTCCAAATGATATTTGAGAAAGAGATTGATTCAGAAGAAGACCTTCAAGATCTTCTTCAATGCTTTCTTCAGTTGAATGCTCCACGTTACCACAATGTCATTGTTGAAGTATTCAATGAAATATGTGAAGATGCGTTTTCTGATAAGGTTAGTAGTACTGCTGAACCTGCATCTTTGTCTAGTGGGAATCACAACATTGATGGAAAGGTTTATGATTATGTGTGTGGAGTTGAAACTTCAAAGGGTTTGGGGTTTGGTATTAAAAAAACAAAAACAAAAACAAAAACAAAAATGCATAGAAAATGTATTAAACGAGTAAGGGTTGGAGAAGGAAGTGTTATCAAATACAAAAGCAAATCAATAAAATCAAGAAAACCAAGAAATATATGA 768 0.3841 MSSNKKGFLRTVFTSNGSCGCGKAKPFEVHEPIPKSKFSIHHNQNTNPSCMSSSTTTSGDCNGGVSSMENEEFTSAATSEPDTAITHDLDHKNNNDNVVLKRSPLMDSVAIEKNSSDPYHDFRHSMLQMIFEKEIDSEEDLQDLLQCFLQLNAPRYHNVIVEVFNEICEDAFSDKVSSTAEPASLSSGNHNIDGKVYDYVCGVETSKGLGFGIKKTKTKTKTKMHRKCIKRVRVGEGSVIKYKSKSIKSRKPRNI 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0374 255 ProSiteProfiles OVATE domain profile. 111 170 IPR006458 -
Lal2g0374 255 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 185 - -
Lal2g0374 255 MobiDBLite consensus disorder prediction 45 91 - -
Lal2g0374 255 MobiDBLite consensus disorder prediction 45 82 - -
Lal2g0374 255 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 185 IPR038933 GO:0045892
Lal2g0374 255 Pfam Transcriptional repressor, ovate 115 170 IPR006458 -
Lal2g0374 255 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lal2g0374 255 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 109 168 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0374 Lal-Chr2 2207875 2208885 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal2g0374 Ovate 2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0374 - - gmx:102660065 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0374 2 2207875 2208885 Lal2g0374 2 2207875 2208885 ECH
Lal25g0074 25 503879 505551 Lal2g0374 2 2207875 2208885 PCT
Lal2g0374 2 2207875 2208885 Lal25g0074 25 503879 505551 PCT