Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0338 ATGATTATAAACCCTAGTTATATATATCAACCCGTAAACGCAACACTCTACGCCTCTCTCTGCACCCAAAACTCAATTGCACGCAGCCCAAAATATTTGTTGCGGCAGAGAGAGAAAAAGATGAAGGTAATTGCAGCTTACTTGCTTGCTGTATTGGGAGGCAAAAATTCCCCTTCAGCTAATGATCTAAAAAATATTCTTTCCTCAGTTGGAGCTGAGGCTGATGATGACAGAATTGAGTTGCTCTTGACTGAAGTTAAGGGCAAGGATATTACTGAACTTATAGCTAGTGGAAGAGAAAAGCTAGCTTCAGTGCCTTCTGGTGGTGGTGCCGTGGCTGTTGCTGCTGCACCATCTGGTGGCGCTGCAGCTGGTGGTGCTGGTCCTGCTGCCGAAGCAAAAGAGGAAAAGAAGGTCGAAGAGAAGGAGGAGTCGGACGATGACATGGGCTTCAGTTTATTCGACTAA 468 0.4573 MIINPSYIYQPVNATLYASLCTQNSIARSPKYLLRQREKKMKVIAAYLLAVLGGKNSPSANDLKNILSSVGAEADDDRIELLLTEVKGKDITELIASGREKLASVPSGGGAVAVAAAPSGGAAAGGAGPAAEAKEEKKVEEKEESDDDMGFSLFD 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0338 155 MobiDBLite consensus disorder prediction 131 145 - -
Lal2g0338 155 MobiDBLite consensus disorder prediction 119 155 - -
Lal2g0338 155 Gene3D - 40 99 IPR038716 -
Lal2g0338 155 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 25 155 - -
Lal2g0338 155 Hamap 50S ribosomal protein L12 [rpl12]. 42 155 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lal2g0338 155 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 25 155 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lal2g0338 155 CDD Ribosomal_P2 41 155 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lal2g0338 155 Pfam 60s Acidic ribosomal protein 57 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0338 Lal-Chr2 2046150 2047566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0338 41 110 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 75.714 2.80e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0338 K02943 - ming:122089001 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0338 2 2046150 2047566 Lal2g0338 2 2046150 2047566 ECH
Lal2g0338 2 2046150 2047566 Lal9g0317 9 2046159 2047803 ECH