Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0336 ATGGAAATGTTAGATTTGGAGGAGCGCACTGTAACATCAAACCCTAACGACAATAACGAAGGAAGAATGATGAAAAAGCCGAAGGTAGTTATCATAACGGGACCCACCGCTTCCGGAAAATCCAAACTCGCCGTCGATTTAGCTTCCTACTTCCCAATCGAAGTTATCAACGCTGATTCCATGCAAGTCTACCGTGGTCTCGATGTTCTCACCAACAAAATCCCATTCTCACACCAAAATGGTGTGCCTCATCATTTGTTGGGTACCGTAAGCCCAAACGTAGAATTCACTGCTAAAGCTTTTCGGGATTCTGCTATTCCTATCGTTCATGACATATTGAATCGCAATCACTTACCTGTTATTGTTGGAGGTACAAATTACTATATCCAGGCTCTTGTGAGTCCGTTTCTTCTAGATGATTTGGCAGAAGATATGAATGAAAGTTGTTTCGACGACTTGTCTGGTATCACACAGTCTGATAGTAGTTTCATTGCTGAAAATGACTCTTCAAATGATAGTTATGACCTGCTTAAAGATATTGATCCAGTTGCAGCAAATAGAATCCACCCAAATAACCATAGAAAGATAAACCAATATATTAGCTTGCATGCTCGTACTGGTGTTCTTCCTAGCAAAGTTTTTCAAGGAAAGGCAGCAGAGAAGTGGGGTCAAGTTGATAACTTAAGATATGATTGTTGTTTCATAAGCGTGGATACATCTCTCCCTGTACTCGACAGATATGTTGAGCAGAGGGTAGATTGCATGATGGATGCTGGATTACTGAATGAAGTCTATGAAATCTACAATTTGAAAGCAGATTATACTAGAGGTTTGCGGCAAGCCATTGGTGTCCGTGAATTTGAGTCTCTTCTTCAAACTTGTGTTGTTGAAGACATTTACAAAAAAGAGAAGGAATTGACTGAGGGGTCCAGCACAGAAAAGGGTGAGACGTTGTTTGATGGTAATCTGAGAGAGTGGTTGAAATCTTCCTCTGATAGCAAATCCTTAATTCTTTTGGAAGAAGCAATTGAAAAAGTAAAAGTTAATACCCGGAGACTTGTTCGTCGTCAGAAAAGAATGCTCAACCGACTGCAAACACTGTTTGGTTGGAACATACGCTACGTTGATTCAACAGAATCAATATCAAGCAAATCAGATGAGATATGGACTGGCCAAGTGGTTGAATCTGCCATGAAGATAATTAGATCTTTCCTGAGTGAGAATGAAAGCTTGGCATCCACCGTTGAGCTGTCTAATTTGACTGGGATGAAAATAATCCAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGTGGAGATCGGGTGCTTAGAGGATCACATGAATGGGAGCAACACAAACAAGGTCGTGGGCACCGAAAACGTGTTTCTAGTCTCAAGAGCAAGGCACGGGGTCTTAATTTGGTGGAACAAAAACTGGAGTATTCTGAGTGCAACTAG 1461 0.4127 MEMLDLEERTVTSNPNDNNEGRMMKKPKVVIITGPTASGKSKLAVDLASYFPIEVINADSMQVYRGLDVLTNKIPFSHQNGVPHHLLGTVSPNVEFTAKAFRDSAIPIVHDILNRNHLPVIVGGTNYYIQALVSPFLLDDLAEDMNESCFDDLSGITQSDSSFIAENDSSNDSYDLLKDIDPVAANRIHPNNHRKINQYISLHARTGVLPSKVFQGKAAEKWGQVDNLRYDCCFISVDTSLPVLDRYVEQRVDCMMDAGLLNEVYEIYNLKADYTRGLRQAIGVREFESLLQTCVVEDIYKKEKELTEGSSTEKGETLFDGNLREWLKSSSDSKSLILLEEAIEKVKVNTRRLVRRQKRMLNRLQTLFGWNIRYVDSTESISSKSDEIWTGQVVESAMKIIRSFLSENESLASTVELSNLTGMKIIQRDLWTQYICKACGDRVLRGSHEWEQHKQGRGHRKRVSSLKSKARGLNLVEQKLEYSECN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0336 486 Hamap tRNA dimethylallyltransferase [miaA]. 29 406 IPR018022 GO:0008033
Lal2g0336 486 Gene3D - 27 429 IPR027417 -
Lal2g0336 486 Gene3D Classic Zinc Finger 430 472 - -
Lal2g0336 486 Pfam IPP transferase 62 359 - -
Lal2g0336 486 Gene3D - 154 217 - -
Lal2g0336 486 TIGRFAM miaA: tRNA dimethylallyltransferase 29 295 IPR018022 GO:0008033
Lal2g0336 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 270 IPR027417 -
Lal2g0336 486 MobiDBLite consensus disorder prediction 1 22 - -
Lal2g0336 486 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 410 IPR039657 -
Lal2g0336 486 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0336 Lal-Chr2 2038485 2041729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0336 32 468 C2H2 Transcription Factor Family AT2G27760 58.864 2.81e-177 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0336 K00791 - gmx:100792690 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0336 2 2038485 2041729 Lal2g0336 2 2038485 2041729 ECH