Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0330 ATGTCTGTTCCAATGGAGTTTTGGGGTGTTGAGGTTAAGGTGGGGCAGGTGGTTAAAGTTGATCAAACTGATCTACTTGGTGTAACCATCCACCTTTCTCAGATTGCTCTTGGAGAATCAAAGAAAGACAAAGCAAGTGAACCTGTGATTATTTCCTTGAAAGTTGATGACAAAAAGTTTGTTTTGGGATCTCTTACTAGGGATGGCATTCCTCAGTTTTCTCTAGATTTATATCTGGACTCCGAGTTTGAGCTTTCTCACAATTCCAAAAATTCTAGTGTCTATTTTAGTGGATACAAAGTTGAAAATGACTTTGACAACGTATCTGACTTTTCTGATAGTGATGAAGATATCCCATTGTTGACCAAAATTGATGGAAATCAAGTTGAAACTGCTGATCCAAAGAAAGAAAACAAGAAAGAATCTGACGATGACGATTCTGTCGATGAAGTTGATTCTGGAAGTTCTGATGAGATTGATGCTGATAGTGATGATGAGATTGACAGTGACGAAGATGAATCTGAAGACGAAGAGACCCCTGTTAAGAAGGTGGACCAGAGCAAGAAGAGACCCAATGGACCTGCATCAAAAGCTCCAATTCCTATCAAGAAAGCTAAAAATGCTACTCCTGAAAAGACCAGTGTTGGTGGTAAGAAAAATGTACAAAAATCTACTCCAAACCCAGTGAAGAAGGGTGGAAAGAATTTCAACAAGAAAGGGCAACGCTCCTAA 732 0.3921 MSVPMEFWGVEVKVGQVVKVDQTDLLGVTIHLSQIALGESKKDKASEPVIISLKVDDKKFVLGSLTRDGIPQFSLDLYLDSEFELSHNSKNSSVYFSGYKVENDFDNVSDFSDSDEDIPLLTKIDGNQVETADPKKENKKESDDDDSVDEVDSGSSDEIDADSDDEIDSDEDESEDEETPVKKVDQSKKRPNGPASKAPIPIKKAKNATPEKTSVGGKKNVQKSTPNPVKKGGKNFNKKGQRS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0330 243 MobiDBLite consensus disorder prediction 129 143 - -
Lal2g0330 243 Pfam Nucleoplasmin-like domain 7 100 IPR041232 -
Lal2g0330 243 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 5 236 - -
Lal2g0330 243 MobiDBLite consensus disorder prediction 116 243 - -
Lal2g0330 243 Gene3D Nucleoplasmin core domain 2 106 - -
Lal2g0330 243 MobiDBLite consensus disorder prediction 213 231 - -
Lal2g0330 243 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 5 236 - -
Lal2g0330 243 MobiDBLite consensus disorder prediction 144 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0330 Lal-Chr2 2004459 2007338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0330 5 213 C2H2 Transcription Factor Family AT3G44750 39.524 5.55e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0330 - - lang:109352045 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0330 2 2004459 2007338 Lal2g0330 2 2004459 2007338 ECH
Lal25g0218 25 1500949 1503697 Lal2g0330 2 2004459 2007338 PCT
Lal10g1199 10 18423427 18426148 Lal2g0330 2 2004459 2007338 PCT
Lal8g0175 8 1185457 1186467 Lal2g0330 2 2004459 2007338 PCT
Lal2g0330 2 2004459 2007338 Lal25g0218 25 1500949 1503697 PCT
Lal2g0330 2 2004459 2007338 Lal10g1199 10 18423427 18426148 PCT
Lal2g0330 2 2004459 2007338 Lal8g0175 8 1185457 1186467 PCT