Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal2g0328 | ATGGAACCACCAGTTGCTAGATCGAGGGGAAGGCCACGGAAGCGGAGAAGAAATGACGAAGATAAACCGGTTGCGGAATTGAAGATGCAAGTTGTGGAGACAAGGTTGATAGCATTGGTTGGGAGATTCGTGCTGAAAAAGTTCCCGAGAAACGGAGTTTTTCTCGGTAAGGTTGTGTATTATGAGTGTGGACTGTATAGGGTTCATTATGAGGATGGGGATTGTGAGGATTTAGATAGCAGTGAGGTTCGTGCAATTCTTGTTAATGATAGTGATTTCGATGCTGGTTTGACTCGAAGGAAGGTCAAATTAGAGGAATTAGTTTCACAGATTCGTGCAAAGGTCACAGATGAGAAGGATAAGGGGTCTGTTGATCATGATAAAGAGGAATCCAAGGTCGAAGCGCCTGTTTCTAGTGAATTGAACAATGATGAACAAGATGGTGAGGGTGATGGTGTCGACTCAAGAGATTCTGGTGCGAGTTTAGGGGAACAGGGTTCTGGCACTGAGTCTGAGACACTGCTTCTGCCACCACCATTGCAGTTACCGCCTTCATCGGGAACTGTCGGTGTGCCTGATCAGTACGTATCGCACCTGTTTGCCGTTTATGGATTCTTAAGATCCTTCACTACTTGCTTGTTTTTAACTCCCTTTACGTTGGATGACTTTGTTGGTGCTCTTAACTGCCAAGTTGCAAACACATTGTTTGACGCTATTCATGTTTCCCTTCTGCGCGCGTTAAAGCATCGTCTTGAAACCGTTTCATCCGAGGGATCAGAGCTTGCATCACAATGCCTTAGGTGCAATGATTGGAGCTTGCTTGATACGCTGACTTGGCCCATTTTTGCGATTCAGTATTTATTTATTAACGGATACACAAAGGGACCCGAATGGAGAGGATTTTATAATGAAATTTTTACCGGGGAGTATTATTTATTTCCTGTGAGTAGGAAACTAATTATATTGCAAATCCTTTGTGATGATGTTTTGGAATCTGAGGAGATAAAAGCTGAAATGAATATGCGCAAAGAATCGGAGGTAGGGGTGGATTATGATGCAGAAGATACCCCTCCTGTGGAAACCAGGCCAAGAAGTCATCATCAAAGATATGGCAAGACTTCTGCTCGTGAGGATAAAGAAGCAATGAAGTTTGTTTCAGTATCAAATGTTGTGAACCAACCTGGTAATTCGATTTCATATTTCAGAGATACTGAAAGCACTGAGGATGGTGATGTTGATAGAAATGGAGATGAATGTCGCCTATGCGGTATGGATGGGACCCTGCTTTGTTGTGATGGGTGCCCCTCTGCTTATCATTCGAGATGTATAGGTGTGATGAAAATGTATATACCAGAAGGGGCATGGTATTGTCCAGAGTGCAAAATTAACATGACTGGGCCAACAATTGTAAAGGGAACAACACTTAGAGGGGGTGAAATATTTGGAAAGGATTTGTATGGGCAACTCTTCGTGGGTACTTGCGACCACTTGCTGGTGCTCAATACCAATGATGACAAACCCCACCTTAAGTATTACAATCCGAATGACATTCCTAAAGTTCTCCAAGTCCTTTATGAATCAATGCAGCATAGAACAATGTATTATGGTATTTGCATGGCAGTGTTACAATACTGGAATGTTTCAGGAAGTTTCTTGCCTCTTTCTGTTTCAACCGGAACAATCTTAAACTCAGTAATTAAAGAAGAGACAGATTTCTCTACTATATCACTTCCTCCCTCGGGTGAAGTCAATCACAGTCCTGTTAATTTGGTGAATGGAGAGTACCCTCTAACCACTCCAAGTTCGAATGATGCTGATATTGCAGTGCCATCTCTTGATGCTTCATCAGTTACCACTCAGAGTCCTGCTCCTGAAAGCCTTTATAATTTTAGAAGTAAAGAGTGCCCTATTGTGGATACAAAGCTTCCTGAGGAAACTAAGATGGAGTCAATCATCTCATTTTGTTCTGTTAGCCATCAGTCTGATGTGAATTACCATCATTCTGTGGATAGTTCTATTTCAATTGATCATGCTAAGTGCTCTTTGGTGAACAGACAACACAGTAATCTGGGTCATGCAAATGTTATGGGGTTGCCTACGAATTGTTCAGTGCAAACCAAAGAAAGCACTCAAGTAGGTTTTGGAAAGTGGGAACACAATATTACTAATGGTTTTGAGTACAAGGGATTCTCTTATAAACCTCTGGCGTACATTAACTACTATATGCATGCCGATTTTGCTGCATCAGCAGCTGCTAAATTGGCTGTTCTTTCTTCAGAGGAGTCTAGGTCAGAGGGTCACGCATCAGACAATCAGAGGAAAAATACAGCTGCAATTGTTTATTTGCAAGCAAAAGCATTCTCACTAACAGCTTCACGCTTCTTTTGGCCAAGTTCTGAAAAGAAGCTTGTGGAGGTTCCAAGAGAGAGGTGTGGCTGGTGTTTGTCATGTAAATCCCATGTTTCAAGCAAGAGAGGATGCATGTTAAATCATGCTGCTCTAAGTGCCACTAAAAGTGCTATGAAATTTTTTGCTGCCTTTTCTGTTTTAAGGAGTGGAGAGGGAAATCTTCCTAGCATTGCAACATATATTATATACATAGAGGAGTGTTTACATGGTTTAATTGTTGGGCCCTTCCAAAGTGCAAGCTACAGAAAGCAATGGCGTGAGCAAGTTGAACAAGCCACAACTTATAGCGCTCTCAAGCTGCTTTTACTTGAACTTGAGGAGAATATTCGTACAATTGCTTTTTGTGGGGACTGGGTTAAGCTGATGGATGATTGTTTGGTAGAATCTTCCATAATACAAAGTGCTCCATCTTCTCTTGGAACAACACAGAAACGTGCACCAAGTGGGAGGCGTTGCAAAAAGCGATCAGCTATTGATGAAGCTAAAGTTGATGCAACCCCAGAAAGCTTTGTATGGTGGCGAGGCGGCAAATTTTCCAAATTCATATTTCAGAAAGCAGTTTTGCCATTATCCATGCTCAGAAAAGCAGCTCGCCGAGGTGGTCGGAGGAAAGTTTCTGGTATTTCCTATACTGACGGCTCTGAAGTCCCTAAAAGAAGCAGGCAACTTGTTTGGAGAGTTGCAGTTCAAATGAGTAGGAATACATCACAACTGGCACTTCAGGTAAGATTTCTAGATTCTTATCTCAGATGGAATGATCTTATTCGCCAGGAGCAGAACATCCAGGATGGGAAAGGTCAAGAGACTGAAGCTTCTACGTTCAGAAATGCAAATATATCTGATAAAAAGCTTGTAGAGGGAAAATGTTGTTATGGAGTAGTCTTTGGGAGCCAAAAACATCTTTCTTCCCGGGTGATGAAAAATGTTGTTGAAATAGAGCAAGGTTCGGATGGAAAGGAAAAATATTGGTTTTCCGAAACACGTATTCCTTTATATTTGGTAAAAGAGTATGAAGAAGCTAATGCAAAAGTGCTATCTGGTGAAGAGTGCTTGAATTTTGTGTCTCAGTTGCACAAAAGGCGGTTGAGGACTAAATGCAAGGACATATTTTTTTACCTTGCCTGCAAGAGAGACAACTTGGATACGTTCTCGTGTTCTGTATGTCATATGGGGGTTTCAATTCGGATTGCCTTCCAGTGCAATGCATGTCAAGGTTATTGTCACGAGGGCTGTTCCATAAGTTCAAAGATCTTTACCAATGAGAAAGTTGAGTACTTGACAACATGCAACCATTGTCACCATGCTAAGTTACTTGCTCTAAAAGAGACTAGTAATGAATTTCCAACTAGCCCCTTACTCTTACGAGGGCGAGAAAATGGTTCTTTGACAATTTTGAAGGGACCGATGCCTAAATATAATGATCAAGCACATAAATCTGCCAGGACAAAAGCTAGCTCTCCTGGCATGAACCAAGTTGGTTCTGTGTCAGTTTTGAGGGGACCAAGATCTAGATGTGATGATCAGGCATTGACTTCTACCAGGACAAAAGATAGTCGTCCCGGCAAGAAACAAGTTGCTTCTTATTCCAGTTCAGCAGCAAAAAGTCGACACAGGAATAGTTCTTGGGGTATTATATGGAAAAAGAAAAATAATGAAGCTGTCGAAAATTCAGCAGACGTTGATTTCAGGCTCAATAACATACTTTTGAAGGGAGGTTCTGGCATGCCTCAAATTGAACCTGTTTGTCACTTGTGTCGGAAGGCATATAGGTCTGATCTGATGTATATTTTCTGTAAGACATGCAACAATTGGTATCATGCTGAAGCTGTTGAACTTGAAGAGTCCAAAATTTTGGATGTGTCAGGCTTCAAATGTTGCAAGTGTCGCAGGATAAAATCACCTGAGTGTCCCTACTCTGATGCGAAGCCTAAGATACAAGAGGGCAAGAAGTCCAGGTCACGCCCAATGGCTTCAAAGAAAGAGCATTTTGCAGCAGATTCTGATTCTGGAACATTTTCTGATATGAAAGAATGTGAACCCGCTACACCTGTCTTTCCTGTAGATGATGATCCTCTGCTCTTTCCTCTTTCAAATGTAGAACTGATTACAGAACCTACGTTAGAAGTGGATATTGAGCAGAATATTGTCTCCGAGTTAGGACCTCGGAAATTACCAGTGAGAAGGCAAGTTAAGTGTGAGGGGGATGGCGATGTGGATGTTGAGTGGAATACTGTCTCTGGACCTCAGAAATTACCTGTGAGAAGGCAAGTTAAGCATGAGGGGGATGGTTATGATTGTTTTGGGGGTAATTCTTTGCATGCTGAGTTCTCATCACAAAATGAAACAGACAATCTGTCCAATCCTGCATGGGGGTCATCAACTCCTTTAGAATATGATACTGGTGTTTGCTTTGACAGCAATCTTATGAATGACTCTGAAAGTTTAAATTATGAATTAATGGATTTTGAACCCAATACCTGCTTCTCTCTTACGGAACTGCTGCAGCCAGATGGTAATAGTAGCCAGTTTGACGGAGTTGATGCATCTGGAGACTTGTCTGGATATGTTGAAAATTCCGGCACCCTTGTTCCTGAAGAATGTGGAGGTGTTAGTTTAGTTGAAAGTTCAAAACCTGCAATTTCCTTTGAAGATGACAACTTCTATTTTTGTTGGCAATGTTGCCAAACAGAACCAGCCCCTGATCTTTTTTGTGAGACTTGTGGGATGTTGATTCACAGCCAATGTTCAACTTGGGCCGAATCACCATCTAGGCTTGGAAATTGGAGGTGCGGTAATTGTCGAGAATGGTAA | 5220 | 0.4178 | MEPPVARSRGRPRKRRRNDEDKPVAELKMQVVETRLIALVGRFVLKKFPRNGVFLGKVVYYECGLYRVHYEDGDCEDLDSSEVRAILVNDSDFDAGLTRRKVKLEELVSQIRAKVTDEKDKGSVDHDKEESKVEAPVSSELNNDEQDGEGDGVDSRDSGASLGEQGSGTESETLLLPPPLQLPPSSGTVGVPDQYVSHLFAVYGFLRSFTTCLFLTPFTLDDFVGALNCQVANTLFDAIHVSLLRALKHRLETVSSEGSELASQCLRCNDWSLLDTLTWPIFAIQYLFINGYTKGPEWRGFYNEIFTGEYYLFPVSRKLIILQILCDDVLESEEIKAEMNMRKESEVGVDYDAEDTPPVETRPRSHHQRYGKTSAREDKEAMKFVSVSNVVNQPGNSISYFRDTESTEDGDVDRNGDECRLCGMDGTLLCCDGCPSAYHSRCIGVMKMYIPEGAWYCPECKINMTGPTIVKGTTLRGGEIFGKDLYGQLFVGTCDHLLVLNTNDDKPHLKYYNPNDIPKVLQVLYESMQHRTMYYGICMAVLQYWNVSGSFLPLSVSTGTILNSVIKEETDFSTISLPPSGEVNHSPVNLVNGEYPLTTPSSNDADIAVPSLDASSVTTQSPAPESLYNFRSKECPIVDTKLPEETKMESIISFCSVSHQSDVNYHHSVDSSISIDHAKCSLVNRQHSNLGHANVMGLPTNCSVQTKESTQVGFGKWEHNITNGFEYKGFSYKPLAYINYYMHADFAASAAAKLAVLSSEESRSEGHASDNQRKNTAAIVYLQAKAFSLTASRFFWPSSEKKLVEVPRERCGWCLSCKSHVSSKRGCMLNHAALSATKSAMKFFAAFSVLRSGEGNLPSIATYIIYIEECLHGLIVGPFQSASYRKQWREQVEQATTYSALKLLLLELEENIRTIAFCGDWVKLMDDCLVESSIIQSAPSSLGTTQKRAPSGRRCKKRSAIDEAKVDATPESFVWWRGGKFSKFIFQKAVLPLSMLRKAARRGGRRKVSGISYTDGSEVPKRSRQLVWRVAVQMSRNTSQLALQVRFLDSYLRWNDLIRQEQNIQDGKGQETEASTFRNANISDKKLVEGKCCYGVVFGSQKHLSSRVMKNVVEIEQGSDGKEKYWFSETRIPLYLVKEYEEANAKVLSGEECLNFVSQLHKRRLRTKCKDIFFYLACKRDNLDTFSCSVCHMGVSIRIAFQCNACQGYCHEGCSISSKIFTNEKVEYLTTCNHCHHAKLLALKETSNEFPTSPLLLRGRENGSLTILKGPMPKYNDQAHKSARTKASSPGMNQVGSVSVLRGPRSRCDDQALTSTRTKDSRPGKKQVASYSSSAAKSRHRNSSWGIIWKKKNNEAVENSADVDFRLNNILLKGGSGMPQIEPVCHLCRKAYRSDLMYIFCKTCNNWYHAEAVELEESKILDVSGFKCCKCRRIKSPECPYSDAKPKIQEGKKSRSRPMASKKEHFAADSDSGTFSDMKECEPATPVFPVDDDPLLFPLSNVELITEPTLEVDIEQNIVSELGPRKLPVRRQVKCEGDGDVDVEWNTVSGPQKLPVRRQVKHEGDGYDCFGGNSLHAEFSSQNETDNLSNPAWGSSTPLEYDTGVCFDSNLMNDSESLNYELMDFEPNTCFSLTELLQPDGNSSQFDGVDASGDLSGYVENSGTLVPEECGGVSLVESSKPAISFEDDNFYFCWQCCQTEPAPDLFCETCGMLIHSQCSTWAESPSRLGNWRCGNCREW | 1739 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal2g0328 | 1739 | MobiDBLite | consensus disorder prediction | 118 | 135 | - | - | |
Lal2g0328 | 1739 | PANTHER | DNA-BINDING AND ZINC-FINGER PROTEIN | 1297 | 1737 | - | - | |
Lal2g0328 | 1739 | PANTHER | DNA-BINDING AND ZINC-FINGER PROTEIN | 1 | 1297 | - | - | |
Lal2g0328 | 1739 | SUPERFAMILY | FYVE/PHD zinc finger | 388 | 462 | IPR011011 | - | |
Lal2g0328 | 1739 | MobiDBLite | consensus disorder prediction | 160 | 174 | - | - | |
Lal2g0328 | 1739 | ProSitePatterns | Zinc finger PHD-type signature. | 419 | 460 | IPR019786 | - | |
Lal2g0328 | 1739 | Pfam | DDT domain | 195 | 247 | IPR018501 | - | |
Lal2g0328 | 1739 | SMART | testlast3 | 193 | 253 | IPR018501 | - | |
Lal2g0328 | 1739 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 399 | 468 | IPR013083 | - | |
Lal2g0328 | 1739 | SUPERFAMILY | FYVE/PHD zinc finger | 1381 | 1437 | IPR011011 | - | |
Lal2g0328 | 1739 | PANTHER | PHD FINGER FAMILY PROTEIN | 1 | 1297 | - | - | |
Lal2g0328 | 1739 | PANTHER | PHD FINGER FAMILY PROTEIN | 1297 | 1737 | - | - | |
Lal2g0328 | 1739 | ProSiteProfiles | DDT domain profile. | 193 | 253 | IPR018501 | - | |
Lal2g0328 | 1739 | CDD | PHD_SF | 1384 | 1431 | - | - | |
Lal2g0328 | 1739 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1374 | 1447 | IPR013083 | - | |
Lal2g0328 | 1739 | MobiDBLite | consensus disorder prediction | 350 | 372 | - | - | |
Lal2g0328 | 1739 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Lal2g0328 | 1739 | Pfam | PHD-finger | 419 | 461 | IPR019787 | - | |
Lal2g0328 | 1739 | MobiDBLite | consensus disorder prediction | 1282 | 1300 | - | - | |
Lal2g0328 | 1739 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 307 | 340 | IPR028942 | - | |
Lal2g0328 | 1739 | SUPERFAMILY | FYVE/PHD zinc finger | 1682 | 1737 | IPR011011 | - | |
Lal2g0328 | 1739 | SMART | PHD_3 | 1384 | 1432 | IPR001965 | - | |
Lal2g0328 | 1739 | SMART | PHD_3 | 1187 | 1236 | IPR001965 | - | |
Lal2g0328 | 1739 | SMART | PHD_3 | 1692 | 1737 | IPR001965 | - | |
Lal2g0328 | 1739 | SMART | PHD_3 | 418 | 461 | IPR001965 | - | |
Lal2g0328 | 1739 | MobiDBLite | consensus disorder prediction | 1269 | 1337 | - | - | |
Lal2g0328 | 1739 | ProSiteProfiles | Zinc finger PHD-type profile. | 416 | 463 | IPR019787 | - | |
Lal2g0328 | 1739 | MobiDBLite | consensus disorder prediction | 118 | 181 | - | - | |
Lal2g0328 | 1739 | MobiDBLite | consensus disorder prediction | 1445 | 1470 | - | - | |
Lal2g0328 | 1739 | MobiDBLite | consensus disorder prediction | 1445 | 1475 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal2g0328 | Lal-Chr2 | 1985034 | 1994896 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal2g0328 | 284 | 591 | EF-hand Containing Proteins | AT5G22760 | 47.771 | 6.86e-77 | 279 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | DDT | Lal2g0328 | DDT | 5.1e-13 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal2g0328 | - | - | lang:109351702 | 3284.58 |