Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0324 ATGTCTCGCCGCGGTGGTGGCAGTTACCAACCTGATCAACGCCGTGATATCCCCTCTCCGGCGCAACCAACTTCTGGTGAAGCTTCCGGAAGAGGCCGTGGCCGTGGTGGTGGTCGTGGTGTTTCTGGTCAAAGCCGTGGAGCGACTCATGTTCCGTCGCCGGTGATAGGTTCTCCTTCCGTGGCGCCTGTGTTCGGTTCTCAACCTACGTTGCCGGTGATCGGTTCTTCTTCTCAGGCGCATGTTGTATCCGGCGCTTCTAGTTCTGTGGCACCGCCTCAAGCCGCCTCTTCTGCCGCGGTTCAGTCAACGGCTTCGACTCCAGTAGAAGCCGTGAGTTCTGAGGTTGCGGAGCGGCTTACATTGCAACCGCCGGCACCTTCGTCATCGAAGGCAGTTAGGTTTCCTAACCGGCCAAGTTATGGTTCACGCGGGAAAAAAATCAGAATCCGTGCCAACCATTTTCTGGTGCAAGTTGCTGACAGGGATTTACATCACTACGATGTGGCAATAAATCCTGAGGTTACTTCGAAGAAGCTTAATAGAGATATTATGAAACAATTGGTTGAAACATATGAAGAGGCACATTTTGGGAAGCGCACACCTGCTTACGATGGCCGGAAGAATCTTTACACCGGAGGCGCATTACCGTTCTCATCGAAAGAGTTTGTTGTTAAGTTGGTTGATCAGGATAAACAACCACATTCTTCTGAAGGTTCAGCAAGTAAAAAACGTGAGCGTGAGTTTAAGGTGACCATCCGATTTGCTTCGAAGCCTGACCTTCATCATCTGCAGCAATTCCTTAGGCGCCAACAGCTTGACTCTCCACAAGAGACTATCCAAGCTCTCGATGTTGTTTTGAGGGCAACACCTTCTTTGAAGTATAATGTTGTGGGGAGTTCATTTTTTTCATCGGATTTGGGGATAAGCGGTGCACCTGGCAGTGGGAGGGGCCCACTTACCAGTGGTACAGAGTACTGGAGAGGGTATTATCAAAGCCTTCGCCCAACACAGATGGGGCTATCTCTGAATGTTGATGTTTCAGCTAGGGCATTCTATGAACCGATTCTTGTGCCTGATTTTCTTGTTGAACATTTTAAATTCAATTTTTCAAGGCCGCTGACCGATCAGGATCGTGTTAAGGTTAAGAAAGCATTGAGAGGAGTTAAGGTACATCTTATGGGAATTGGGAATACTAGAAGTTACAAAGTTGCTGGTGTCTCAAAAGAGCCCTTGCGGGAGTTGACATTTATCCTGGATGACAAAAAAACCAAAAAATCAGTTGTTCAATATTTTTATGAGAAATATGATGTTGAGTTGAAGTATACAAATCTTCCTGCTGTCCAAGCTGGAAGTGACACAAAACCAGTCTACCTACCCATGGAGCTTTGTCAGATTGCCTCGGGACAGAGGTACACCAAGAGATTAAACGAGAACCAAGTCACTGCTCTTTTAAAAGCAACTTGTCAACGTCCTCATGAAAGGGAAAATTACATTAAACAGATTTTGAGGCAGAACAATTTCAACACAGACAAGCTTGTGCATGACTTTGGAATTCAAGTAAAAGAAGAACTAGCAACGATTGAAGCCCGTGTCTTGCCTCCCCCAACGCTTTTATATCATCAAACAGGGAAAGAATCAAGTGTTGACCCCTGGATGGGGCAATGGAATATGATAAACAAGGTGAAAATGATTGATGGTGGCAAGGTGCTATATTGGGGTTGTGTCAACTTTTCAACAAGAGTTAACAGAGACTTGCCTTCAACTTTTTGTTTTGAGCTAGTCAATATGTGTACTAGCAAAGGAATGGTTTTTGCTCCAGAGCCTTTGGTACCCATCATTTCTGCTCAGCCTTCTCAAATAGAGAGAGTTCTTGCGGATGTACATAAGCAGTCTGTGAGTAAGCTTGCAAACATGAAGCTGGACGGAAAACTTCAGCTGTTGATAATAATTCTGCCTGATGTCAAGGGGTCCTATGGAAGAATAAAGCGTATTTGCGAAACTGAATTAGGAATAGTCTCTCAATGCTGTCAGCCTAAGCAAGCTTCAAAATTGAGTAAACAATACCTTGAAAATATTTCCCTCAAGATAAATGTCAAGGCTGGTGGTCGAAATACAGTTTTGAATGATGCTATTCGAAGGACAATTCCTCATGTGAGCGATCTACCAACATTAATCTTGGGTGCAGATGTGACACATCCACAACCAGGAGAAGATTCCAGCCCTTCTATAGCTGCGGTTGTGGGATCCATGGATTGGCCTTGGGTCACAAGATACAGGGGAATTGTTTCTGCTCAATCTCATCGTGAAGAAATTATTCAGGATCTTTATAATTCTTATCAGGATCCTAAGAGGGGATTGGTACATGGTGGAATGATCAGGGAGTTACTTAGAGCTTTCTACCAGTCAGCCAAGGTTAAGCCTGCCAGGATTATATTCTACAGAGATGGTGTTAGTGAGGGTCAATTCAGTCAAGTTTTGCTTCATGAAATGGATGCAATTAGAAAGGCTTGTCTCTCATTAGAAGAGGGATATCTACCCCGGGTTACCTTTGTGGTGGTACAGAAGAGACATCACACTCGGTTTTTTCCTGTTGATCGTTCTCAGGCGGATAAAAGTGGAAACATTATGCCAGGGACTGTAGTGGACACCTCTATCTGTCACCCTAGGGAACATGATTTTTACCTTAATAGTCATGCCGGGATTCAAGGAACAAGTCGACCTGCCCATTATCATGTTTTGTACGATGAAAACAATTTCACTGCTGATGAGCTGCAAAGTCTTACAAATAACTTATGTTATACGTATGCAAGGTGCACTCGAGCTGTATCCATAGTCCCTCCTGCTTATTATGCACACCTGGCTGCTTTCCGAGCTCGCTATTATATTGAAGGGGAAGCATCAGAAATAGGTTCTACAAGTGGTGGAAGTGGAAGCAAGGGCACTAATGTGGTGGTGACTATGCCCTCAGTCTTGGATAATGTAAAAGAAGTCATGTTTTTCTGCTGA 3009 0.4463 MSRRGGGSYQPDQRRDIPSPAQPTSGEASGRGRGRGGGRGVSGQSRGATHVPSPVIGSPSVAPVFGSQPTLPVIGSSSQAHVVSGASSSVAPPQAASSAAVQSTASTPVEAVSSEVAERLTLQPPAPSSSKAVRFPNRPSYGSRGKKIRIRANHFLVQVADRDLHHYDVAINPEVTSKKLNRDIMKQLVETYEEAHFGKRTPAYDGRKNLYTGGALPFSSKEFVVKLVDQDKQPHSSEGSASKKREREFKVTIRFASKPDLHHLQQFLRRQQLDSPQETIQALDVVLRATPSLKYNVVGSSFFSSDLGISGAPGSGRGPLTSGTEYWRGYYQSLRPTQMGLSLNVDVSARAFYEPILVPDFLVEHFKFNFSRPLTDQDRVKVKKALRGVKVHLMGIGNTRSYKVAGVSKEPLRELTFILDDKKTKKSVVQYFYEKYDVELKYTNLPAVQAGSDTKPVYLPMELCQIASGQRYTKRLNENQVTALLKATCQRPHERENYIKQILRQNNFNTDKLVHDFGIQVKEELATIEARVLPPPTLLYHQTGKESSVDPWMGQWNMINKVKMIDGGKVLYWGCVNFSTRVNRDLPSTFCFELVNMCTSKGMVFAPEPLVPIISAQPSQIERVLADVHKQSVSKLANMKLDGKLQLLIIILPDVKGSYGRIKRICETELGIVSQCCQPKQASKLSKQYLENISLKINVKAGGRNTVLNDAIRRTIPHVSDLPTLILGADVTHPQPGEDSSPSIAAVVGSMDWPWVTRYRGIVSAQSHREEIIQDLYNSYQDPKRGLVHGGMIRELLRAFYQSAKVKPARIIFYRDGVSEGQFSQVLLHEMDAIRKACLSLEEGYLPRVTFVVVQKRHHTRFFPVDRSQADKSGNIMPGTVVDTSICHPREHDFYLNSHAGIQGTSRPAHYHVLYDENNFTADELQSLTNNLCYTYARCTRAVSIVPPAYYAHLAAFRARYYIEGEASEIGSTSGGSGSKGTNVVVTMPSVLDNVKEVMFFC 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0324 1002 Pfam Argonaute linker 2 domain 494 540 IPR032472 -
Lal2g0324 1002 Pfam N-terminal domain of argonaute 146 287 IPR032474 -
Lal2g0324 1002 PANTHER PROTEIN ARGONAUTE 1A 43 982 - -
Lal2g0324 1002 Pfam Argonaute linker 1 domain 298 354 IPR014811 -
Lal2g0324 1002 Pfam PAZ domain 381 484 IPR003100 GO:0005515
Lal2g0324 1002 CDD PAZ_argonaute_like 358 467 - -
Lal2g0324 1002 Gene3D - 532 710 - -
Lal2g0324 1002 Gene3D paz domain 350 472 - -
Lal2g0324 1002 MobiDBLite consensus disorder prediction 1 60 - -
Lal2g0324 1002 SMART PAZ_2_a_3 360 493 IPR003100 GO:0005515
Lal2g0324 1002 SMART Piwi_a_2 647 964 IPR003165 GO:0003676
Lal2g0324 1002 CDD Piwi_ago-like 514 963 IPR045246 -
Lal2g0324 1002 SUPERFAMILY Ribonuclease H-like 641 964 IPR012337 -
Lal2g0324 1002 MobiDBLite consensus disorder prediction 121 141 - -
Lal2g0324 1002 SUPERFAMILY PAZ domain 351 509 IPR036085 GO:0005515
Lal2g0324 1002 ProSiteProfiles Piwi domain profile. 647 964 IPR003165 GO:0003676
Lal2g0324 1002 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 43 982 - -
Lal2g0324 1002 ProSiteProfiles PAZ domain profile. 372 468 IPR003100 GO:0005515
Lal2g0324 1002 SMART DUF1785_2 296 355 IPR014811 -
Lal2g0324 1002 Pfam Piwi domain 648 963 IPR003165 GO:0003676
Lal2g0324 1002 Gene3D - 716 1002 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0324 Lal-Chr2 1963027 1968722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0324 94 1002 Eukaryotic Initiation Factors Gene Family AT1G48410 56.642 0.0 1072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0324 K11593 - gmx:100799033 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0324 2 1963027 1968722 Lal2g0324 2 1963027 1968722 ECH
Lal2g0324 2 1963027 1968722 Lal9g0305 9 1968455 1977685 LSH