Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0320 ATGGCTATTGCTGGTCTGCATAATGTGTCTGTACGCGACTCTTCTTTTCTCAGGGAATCCCTTTCTCAGTCATCTAGGAGGCGCAGAGATGGAAGAAGAGGAAACACTCAGTCATCACTATTGCAAATATGGCGAGAGATTGAGGATGATCATGTGGTGAGTCAAGTTCATGGCAGGCCTGGTGAAGTATTAGTCGAACAAAGGAGTGATGGGTTGATTGATGACCTTTCACATGCCGATACACCACGTAGCCATGAGAGAGGACGGGGAAATATTTTAGAAGAGGCAGTTTTGGCAGATAATGACTCTGAAGTGTGGTCACAGTCACAAAGTCAGAATGAATTGCATGATGATCACGAGGATTTAAACAACTCTAGTTGTGAAAACTCTTCTGATTTCGGAGAAGTTGAAAGGGAAAGAGTGAGGAAAATATTTAGGGAGTGGATGAATAGTGGTGCTAGGGAGTATGGGTCGAACATTTCCCGAAGAAATAACAGTCCGATTGGAGAATGGCTTGGTGAAACAGAGCAGGAAAGGGTGAGAATCATAAGGGAGTGGGTACAATTGAGTAGCCAGCAGAGAGGCGTTTCTTCTGTGGAAAATAGGGAAGAACAATTTGCTGAAATTGATACTCAAATTGAGCGTGTTCGGGATGGATTTGTTCTTAACCAGAGTGAGCATACACGGAGAGGCATTCGTAAATTTTGTGGTCGACAGGTTATGCTTGATATGCTTAAGAAGGCTGAGAGGGAAAGGCAAAGAGAAATTCAGGATTTGTTGGACCATCGGGCTGTATCTCATTTCCCCCACCGTAATCGTATACAGGCATTGCTTAGAGGAAGGTTCTTGAGAAATGATAGATGTGGTGATAATAACATGCCCACTTCCACCGCACGAAGTGAATTAGGCTTATTGAGGCAAAGACAAACTGTATCAGGCCTTAGGGAGGGATTCTTCTCTAGAAAGGATAATACTGGTTGCAATCAAGCAACCAGCAACCTATCTGATACTTCATCTATAAGTGATATTGATTTTAATACAAGTGAACAAACTGGAGCCAGCAGTTCACAGCTGGTCCCAACTGTACATTATGAACCTAATAACAGAGGAAGTGATGGACTTCACATATCAGGTGACCAAAATTATTTACATGGAGTCACGCTTGAAAATATACGAGACTCAACTCTTCATGTAGAAGACCAGTTGCAGTCTATGCAAATTGAATCACTAGATTCCCAACCATCACCCAATGTTTATGTCAATGGAAGAGGCATCATTGGGCAAAATGTTGATATGGCGTTAACCGAAGATAGTGCTAACGAACTCATGCAAGAAAGTTTGCAAATTGAAGATTCGGAGAATAGTAATCTGCAGGAATTTTGTGAGGCTTATAATGAACAATCTGAGTTGGGTGATATACGTAATGGTGAAAACAATCATATGGAGGACAATGTCGTTGATGATATGAATTGGAGTGAATCCAATGCACTACACGGAGATGATCTGGAAGAAGTTATTGATAGTGAAGGAAATGACTGGCATCAGAGTAATACCGAAGGGAGAAATAGTACTGAGGAAAACTTGGATGATAATCATATCAGTAGTACAACAAACGAGTGGCATGAAAACGGTCTGGGATATGAAGATGGAGATAATACTCGCCCGCAAGTAGCTCCTGAAGTGTGGCAAGAAGATAGTGGCTTCCAAGAGGCTGTGGAAAATTGGTTTGGAGGACCTTCTGGTCATGAAGACACTCCTGTTGGTAGAATTCCTAGATTTTATTTCCCTGATGATAATAATGTGTATAGTGTTGAACTTAGGGAACTGCTTAGTAGGAGAAGTGTTTCTAACCTTCTTCATAGCAGCTTCCGTGAGAGTCTTGACCAGTTGATACAATCATATGTTGAAAGGCAAGAAGGTAATGTTCACATTGAGTGGGAGCTGCAAGAAACAACCCCTTCTTCTGCCTCAATAGAACAGGACCTTGAGCAGCAGAGTAGGGATCAGATTGTTGGCCAGGAGGGTACTGTTAATAGTCCTCGTGACCTACCCTCTTTACCAATACCTCCTCCTTTGCCTCTTTGGGATCGGCGTTCTCATCGTGACAACTGGTCACAAAATGACGTAAATAATCAACATCTAGGAATGGATTGGGAGGTTAATGACTTGAGACTTGACATGGCTAGACTACATCAGAGGATGAATACTATGCAGAGAATGCTGGAGGCCTGTATGGATATGCAGGTTGAGTTGCAGCGCTCAATCCGACAAGAAGTTTCTGCAGCCCTAAATCGCCCAGCTGGCTCATCAGGAACAAATGCCTGTGAACCATCATATGATGAATCTAAATGGGAATGTGTGAGAAAAGGGCTTTGCTGTATATGCTGCAAAAGCAGTATTGATTCATTGTTGTACAGATGTGGACACTTGTGCACATGTTTAAAATGTGCCAACGAGTTGCTCCAAAGTCGAAGGAAATGCCCAATGTGTCAAGCACCTGTGGTGGAGGTGATACGTGCATATTCTATGCTATAA 2535 0.4256 MAIAGLHNVSVRDSSFLRESLSQSSRRRRDGRRGNTQSSLLQIWREIEDDHVVSQVHGRPGEVLVEQRSDGLIDDLSHADTPRSHERGRGNILEEAVLADNDSEVWSQSQSQNELHDDHEDLNNSSCENSSDFGEVERERVRKIFREWMNSGAREYGSNISRRNNSPIGEWLGETEQERVRIIREWVQLSSQQRGVSSVENREEQFAEIDTQIERVRDGFVLNQSEHTRRGIRKFCGRQVMLDMLKKAERERQREIQDLLDHRAVSHFPHRNRIQALLRGRFLRNDRCGDNNMPTSTARSELGLLRQRQTVSGLREGFFSRKDNTGCNQATSNLSDTSSISDIDFNTSEQTGASSSQLVPTVHYEPNNRGSDGLHISGDQNYLHGVTLENIRDSTLHVEDQLQSMQIESLDSQPSPNVYVNGRGIIGQNVDMALTEDSANELMQESLQIEDSENSNLQEFCEAYNEQSELGDIRNGENNHMEDNVVDDMNWSESNALHGDDLEEVIDSEGNDWHQSNTEGRNSTEENLDDNHISSTTNEWHENGLGYEDGDNTRPQVAPEVWQEDSGFQEAVENWFGGPSGHEDTPVGRIPRFYFPDDNNVYSVELRELLSRRSVSNLLHSSFRESLDQLIQSYVERQEGNVHIEWELQETTPSSASIEQDLEQQSRDQIVGQEGTVNSPRDLPSLPIPPPLPLWDRRSHRDNWSQNDVNNQHLGMDWEVNDLRLDMARLHQRMNTMQRMLEACMDMQVELQRSIRQEVSAALNRPAGSSGTNACEPSYDESKWECVRKGLCCICCKSSIDSLLYRCGHLCTCLKCANELLQSRRKCPMCQAPVVEVIRAYSML 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0320 844 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 843 - -
Lal2g0320 844 CDD mRING-HC-C3HC5_NEU1 792 830 - -
Lal2g0320 844 MobiDBLite consensus disorder prediction 102 134 - -
Lal2g0320 844 Coils Coil 245 265 - -
Lal2g0320 844 SUPERFAMILY RING/U-box 785 837 - -
Lal2g0320 844 Pfam Zinc finger, C3HC4 type (RING finger) 789 836 - -
Lal2g0320 844 Coils Coil 720 740 - -
Lal2g0320 844 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 778 842 IPR013083 -
Lal2g0320 844 ProSiteProfiles Zinc finger RING-type profile. 792 831 IPR001841 -
Lal2g0320 844 PANTHER PROTEIN, PUTATIVE-RELATED 1 843 - -
Lal2g0320 844 MobiDBLite consensus disorder prediction 511 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0320 Lal-Chr2 1923549 1928728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0320 792 838 C3H Transcription Factor Family AT3G06140 40.426 4.33e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0320 - - lang:109351692 1481.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0320 2 1923549 1928728 Lal2g0320 2 1923549 1928728 ECH
Lal2g0320 2 1923549 1928728 Lal9g0301 9 1928264 1934123 ECH
Lal2g0320 2 1923549 1928728 Lal9g0301 9 1928264 1934123 LSH
Lal25g0210 25 1433362 1438666 Lal2g0320 2 1923549 1928728 PCT
Lal2g0320 2 1923549 1928728 Lal25g0210 25 1433362 1438666 PCT