Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0303 ATGATGAGCAAGAGAGATATAAAGAATGTTGCTTTTCTTATAATTGTTGTTGTATTAAGCAGCATTGTGGGGCCATTGCAAGTTTCATGTCAGACTAATAATAATGATAATGATAGTGATGGTGGTGGTGCTGGGGTTCAGATATTGGCCCAGGAATTATACCGTGCCAGCATGACCAACATTACCAAGATCTTGAAAGCTACAATAAAAAAAGAGTTGGGTTTTTGCATAGTTGATGTAGATGCAGATTGGGATGGGGCTTTCAATTTCACCAAAGATCTGCATTTTTTGACCATGTGTTCCCAGAAATTAAAAGGTGATATCACACAGCGAATTTGCACAGCAGCAGAAGTTGAAGCTTATGCTAGAAGTTTTACAAGCAAATCCAAATCCATATTTTTGCAGCCTAACATAAACTGTAATATGAGCTCATGGCTCAATGGATGTGAACCTGGGTGGGCCTGTAAAGCTAATGATAAAGTAGAGCTTAACAATAACAAGAAGGAGATACCTCTTAGATCTGTTGATTGCCAACCTTGTTGTGAAGGCTTCTTCTGCCCTCATGGTATCACCTGCATGATACCCTGCCCATTAGGTTCTTACTGTCCACGTTCGGAACTCAATAAAACTAGTGGAATATCAGAATCAATATGCAGATATCGGTATCAGATACCTCCCGGAAAGTTTAACCATTCTTGTGGAGGAGCAGATATTTGGGCAGACATTGTAAGTAGTGGAGAAGTATTCTGTTCAGCAGGATCATTCTGCCCATCGACTATCCAAAAAAATCCTTGCAATAAAGGGCATTACTGCAGAACAGGTTCTACGGCTCAAGAGCGATGTTTCAGATTGGCAAGCTGTGAGCCTAAATCATCAAATCAGAATATTACAGCATATGGTGTCCTGGTTTTTGCTGGTTTGTGTTTCATGCTTATTATCATATATAATTGCTCTGACCAAGTTCTTGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCAGCTCAAAGTGTAAGAGAAACACAAGCACGTGAAAAATGGAAATCAGCAAAAGATATTGCCAAGAAACATGCTACTGACCTGCAATCACAATTATCGCGTACTTTTTCTCGCAAAAAATCTACAAAGACTCCGGAATTTAAAGGTGTTTTACCACCTGTGGCTGGCACATCAAAAGCAAAGAAAAAAGATAAAAACGACCTTTCAAAAATAATAAATGAAATTGAGGAAAACCCTGAGAGTCAAGAAGGGTTTAATGTTCAGATAGGAGATAAGAATGCGAAAAAGGCACCAAGGGGTAAGGCATTGCATACTCAGAGCCAAATGTTCAGGTATGCATATGGTCAGATTGAAAAAGAAAAGGCCTTACAGGAACAAAATAAAAACTTGACCTTCTCTGGAGTTATTTCAATGGCTAGTGATATTGATATAAGGAAGAGGCCTACAATTGAGGTTGCTTTTAAAGATTTAACACTCACTTTGAAGGGTAAAAACAAACATCTATTAAGAAGTGTTACTGGGAAGTTATATCCTGGTAGAGTTTCAGCAGTCATGGGCCCTTCTGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCACACAACTGGACAAGTTCTTGTAAATGACCAAGAATCTTCTATTACATCATACAAGAAAATCATTGGTTTTGTCCCACAAGATGATATTGTGCATGGTAATCTGACAGTGGAGGAGAATCTGTGGTTCAGTGCCAGATGCAGACTTTCTGCTGATCTACCAAAAGAAGAGAAGGTTTTAGTGGTTGAAAGAGTCATTGAGGCCTTGGGTCTGCAGGCAATAAGGGATTCTCTGGTTGGGACAGTGGAGAAGCGAGGAATCTCAGGAGGTCAAAGGAAGAGAGTAAATGTAGGACTGGAAATGGTTATGGAACCTTCACTTCTAATTTTAGATGAACCTACTTCTGGTTTGGATAGCTCATCTTCTCAGTTACTTCTAAGAGCACTTCGACGTGAAGCTCTCGAAGGAGTAAACATATGTATGGTCCTTCATCAACCAAGGATGTTTGATGATTTTATACTACTAGCTAAAGGAGGTCTTACAGTGTATCATGGACCAGTGAACAAAGTGGAAGAGTACTTCTCCAGCATAGGGATTGTTGTCCCTGACAGAGTGAATCCACCAGATTACTACATTGACATTCTAGAAGGAATAGTAAAACTACCAGCAAGCTCAGGAGTGAACTATAAACAACTACCAGTTAGGTGGATGCTTCATAATGGATACCCCGTGCCGATGGATATGCTGTCAACTGTTGAAGGAATGGCCACCCCCGGTGAAGGTTCTGCACATGGAGCTGCTACAACAACAGGGAATGCTGATGATACTTCCTTTGCTGGAGAGCTTTGGCAGGATGTTAAGTGTAACGTTGAGCTCAAGAGGGACAATCTTCAACACAACTTCTTAAGTTATTCACATGATTTGTCTAATCGAGAAACACCTGGAACTTTCACACAGTACAAATACTTCCTTGGAAGAGTTGGAAAGCAAAGGTTACGAGAAGCTAGAATGCAAGCTGTAGATTTTCTAATTTTGCTACTAGCTGGCCTCTGCTTAGGAACACTTGCCAAAGTGAGCGATGAATCGTTTGGATCAACCGGTTATACATACACTGTAATAGCAGTATCACTCCTTTCAAAAATTGCCGCTTTGAGATCCTTCTCTTTGGATAAGCTGCACTACTGGAGGGAGAGCGCTTCCGGCATGAGTAGTTTGGCTTACTTTCTCTCAAAGGATACAGTTGATCATTTCAGTACAATTGTCAAACCTCTGGTTTATCTATCAATGTTTTATTTCTTCAACAATCCAAGATCATCTGTCGTAGATAACTACATTGTTCTCCTGTGCTTGGTGTATTGTGTCACTGGCATAGCTTATGTGTTAGCAATCTTCCTTCAACCTGGTCCAGCACAGTTGTGGTCAGTGCTACTTCCTGTGGTTTTGACTCTCGTCGCAACCTATGATAACCAAGAAGATAGCAAATATGTACGCTTTCTATCCGACTTGTGCTACACAAAGTGGGCTCTTGAAGCATTTGTAATATCAAATGCCAAAAGATATGCTGGAGTTTGGTTAATAAGCAGATGTGGTGCACTACATGCAAGTGGCTATGATCTCAACCATTGGTATCAATGTTTAGGCCTACTTATACTAACAGGAATAGTTAGCCGAATGCTTGCATTTTTTTGCATGAGGAAAAATAAAGTTACTGGGCAGCAGCAAAAGAGAGAAGAGCTTGAAAGAGAGGTATCTATGCTACAAAGGTTGTTGGACCAAGAAGAAAAGATGCATGAAATTTTGGAGATGATGCATAATAGACCAAATGGTTCTGCTATATCTATTCCTAATTTTCTTCCTCCCAAGATGAGAGAACTCTTATTAGAGCTGGTGGCAGTTGAAGATGAGATAGCGCGTCTCGAAAGCCAAATAAGCCATCTTCAAGCTGGTTTGAAACATGAACAAAAAGTAAACAATGAACCAAAGTCAAAAGCATGGAACCAAGGGGATTTGAACTATTCTAGCAATCATTTATCAACAGCAACAATTCCAAGTCCTAGTCCTATCCAAAAAAGTGCTCATGAAAGGATGGTATTTGAAACTAAAGCATTGCATTTCATAAGCAAAGCTATAAAGGGTGATTACAATCTCAATGAATTCAGCCTGAATGACAAAACAGGATTTTTGAAAAAATCTGCTGAACAGAAAGAAGATAATTTTAATTTCCAAGATGTGAAATTTCAAGAAAGGCTTAAAAGAAAAAATGGGATTATGAAGCCTCTCTCACCCATGTGTGACCCCCGCCATCCATCACCTAAGCTGAGGGAACGTAATCTAGAAATGTACTTAGACCTTCCAACTAGATCACTACTGGATCCACTTCTGTCAGAAGAGAATGACCTGAAATGGCAACCCAACAAGTTATCTGAGAGCATCATGAAGTGCTTGAACTTCATATATGTAAGACTATTCAGAACATCAAGAGCAATGGAATTGGAGAAGTCAGGTCCAGTTTCAAGGTCTATGCATTCTTCTTTAAGCTCAAGAAGCTTCAGGGTGGATACTGTGTCAAATCCAAAATTAAGCCTTGTAATGCAAAGAGAATCATCAAGGCAGCAAGATCCATATGGTATCTTTGATACTAAAGAGTCCATTCCAAGGGATATTGGTCCTTACAAGAACCTGGTTATATTCACCTCCAGCTCTATGGATCCTAAGTTTATCTCAAGTCCTTCATCTATTCCATTATTGAGAAAGTTAAGGATTTTGATGAGCAATCTTCAGACAGTTGATTTGAAAAGCCTTACTTACCAACAAAAATTAGCATTCTGGATCAACCTTTACAATGCTTGTATCATGCATGGATTTATCCAATATGGAGTGCCGTCCACACCAGAAAAGCTACTTACATTGTTGAACAAGGCAACCCTCAATGTAGGAGGCCACATGATAAATGGTAAAGAAATAGAGCATTTCATTTTAAGGAAACGAGTTACTTATATGAAAGAGGTGGTACAGATGAAGGGTGAGTTGGATGAGAAAGAATCAGTTGTTGGTGAAGTTTATGGACTTGAGTCTATGAATCCTAATGTCACATTTGCATTGTGCTGTGGAACTCGTTCTTCACCAGCTGTTAGGATATACACAGGTGATGGTGTTATAGGTGAATTAGAGAAATCAAAACTAGACTATTTGCAGGCTTCTATATTGGCAACTAGTACCAAAAGGGTTGCATTCCCTGAACTACTTATGAGAAACATGTTTGATTTTGCAATGGACACAGATTCATTGGTGGAATGGATATTCAATCAGTTACCTACATCTGGGACTCTAAGGAAATCAATGGTGGATTGCTTCAGAGGCCATAGTAATGTCAAGGCTTCTACCGTTGTTGAGAAGATACCCTATGACTATGATTTCCAGTACTTGTTGCCAATGTAA 5001 0.3959 MMSKRDIKNVAFLIIVVVLSSIVGPLQVSCQTNNNDNDSDGGGAGVQILAQELYRASMTNITKILKATIKKELGFCIVDVDADWDGAFNFTKDLHFLTMCSQKLKGDITQRICTAAEVEAYARSFTSKSKSIFLQPNINCNMSSWLNGCEPGWACKANDKVELNNNKKEIPLRSVDCQPCCEGFFCPHGITCMIPCPLGSYCPRSELNKTSGISESICRYRYQIPPGKFNHSCGGADIWADIVSSGEVFCSAGSFCPSTIQKNPCNKGHYCRTGSTAQERCFRLASCEPKSSNQNITAYGVLVFAGLCFMLIIIYNCSDQVLATRERRQAKSRERAAQSVRETQAREKWKSAKDIAKKHATDLQSQLSRTFSRKKSTKTPEFKGVLPPVAGTSKAKKKDKNDLSKIINEIEENPESQEGFNVQIGDKNAKKAPRGKALHTQSQMFRYAYGQIEKEKALQEQNKNLTFSGVISMASDIDIRKRPTIEVAFKDLTLTLKGKNKHLLRSVTGKLYPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVLVNDQESSITSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIEALGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPRMFDDFILLAKGGLTVYHGPVNKVEEYFSSIGIVVPDRVNPPDYYIDILEGIVKLPASSGVNYKQLPVRWMLHNGYPVPMDMLSTVEGMATPGEGSAHGAATTTGNADDTSFAGELWQDVKCNVELKRDNLQHNFLSYSHDLSNRETPGTFTQYKYFLGRVGKQRLREARMQAVDFLILLLAGLCLGTLAKVSDESFGSTGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTIVKPLVYLSMFYFFNNPRSSVVDNYIVLLCLVYCVTGIAYVLAIFLQPGPAQLWSVLLPVVLTLVATYDNQEDSKYVRFLSDLCYTKWALEAFVISNAKRYAGVWLISRCGALHASGYDLNHWYQCLGLLILTGIVSRMLAFFCMRKNKVTGQQQKREELEREVSMLQRLLDQEEKMHEILEMMHNRPNGSAISIPNFLPPKMRELLLELVAVEDEIARLESQISHLQAGLKHEQKVNNEPKSKAWNQGDLNYSSNHLSTATIPSPSPIQKSAHERMVFETKALHFISKAIKGDYNLNEFSLNDKTGFLKKSAEQKEDNFNFQDVKFQERLKRKNGIMKPLSPMCDPRHPSPKLRERNLEMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLFRTSRAMELEKSGPVSRSMHSSLSSRSFRVDTVSNPKLSLVMQRESSRQQDPYGIFDTKESIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKSLTYQQKLAFWINLYNACIMHGFIQYGVPSTPEKLLTLLNKATLNVGGHMINGKEIEHFILRKRVTYMKEVVQMKGELDEKESVVGEVYGLESMNPNVTFALCCGTRSSPAVRIYTGDGVIGELEKSKLDYLQASILATSTKRVAFPELLMRNMFDFAMDTDSLVEWIFNQLPTSGTLRKSMVDCFRGHSNVKASTVVEKIPYDYDFQYLLPM 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0303 1666 Coils Coil 1090 1117 - -
Lal2g0303 1666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 721 IPR027417 -
Lal2g0303 1666 Pfam ABC transporter 504 656 IPR003439 GO:0005524
Lal2g0303 1666 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 42 1088 - -
Lal2g0303 1666 CDD ABCG_EPDR 485 706 - -
Lal2g0303 1666 Gene3D - 486 718 IPR027417 -
Lal2g0303 1666 Pfam ABC-2 type transporter 688 1087 IPR043926 GO:0140359
Lal2g0303 1666 MobiDBLite consensus disorder prediction 331 360 - -
Lal2g0303 1666 Coils Coil 393 413 - -
Lal2g0303 1666 MobiDBLite consensus disorder prediction 331 401 - -
Lal2g0303 1666 Pfam Leucine-zipper of ternary complex factor MIP1 1094 1174 IPR025757 -
Lal2g0303 1666 SMART AAA_5 513 709 IPR003593 -
Lal2g0303 1666 Pfam Protein of unknown function, DUF547 1453 1585 IPR006869 -
Lal2g0303 1666 ProSitePatterns ABC transporters family signature. 628 642 IPR017871 GO:0005524
Lal2g0303 1666 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 487 724 IPR003439 GO:0005524
Lal2g0303 1666 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 42 1088 - -
Lal2g0303 1666 Coils Coil 1143 1170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0303 Lal-Chr2 1787143 1798432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0303 476 686 Calmodulin-binding Proteins AT2G36910 25.926 3.08e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0303 - - gmx:100794093 1778.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0303 2 1787143 1798432 Lal2g0303 2 1787143 1798432 ECH
Lal2g0303 2 1787143 1798432 Lal9g0283 9 1785396 1791414 LSH