Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0302 ATGAGCAGCTTAAGGCCTGAATTGCATGTTGCTCAACAACTTAGACGTGACAAGTTGAGAATCAACGAGACCAGTAGTTCTCAGCATCAACATCTACAACAAGAGTTCCCCAACAATCTTGAACAGTATTTATCTTTGCACCCAGAGTTCAACTTGGATCTCCTTCAAGCTCGGGATAATAATAATGTTAGAAATGCCGACATGCTTGATGAGGCACCTCTTTATTCATCTGAAATGATTCCTCCTCATCAATATACTTCATTTCCCCATTCATCATCCACCATCATTCATTCTTCCCCAAAACAACAGTGTGGTAATTGGATGGTAAATCATGGAAGCACTTCTTCTGTGGCTAACCAAAGCCATAATCTAAACTCTATTGTGCCTTTTGAGCTCAACAATAATATGTCTACTCACCAGCAACAGTATGATCATAAGCCTAGCTTTAATACTAATATTGTAGTCACGGATGCACAGTCTTCTTCGCCTTCGCTGTATCAGAATGCTTTGCAAGACATATTCAAGTCTTCTTCTATCAGTGCTCACACCTCAGAAATGGATTCACTTAAAAAAAATCATGGCATTTGGGGAGGGAATGCTAGTGAGTCTGTACTTTATATTCCAAGCTATGCAAATCAAGCAAATATGTGGACTAATCAAAATAGTTTCAATGACAAGATGACCAATGGACCACAACAACAACAACAACAGAAACACACCAGAAATGTGTTCAGTGATTCCAAGAATCCTCAAGGGTTGTCCTTATCACTCTCATCAAATTCACAATCTAACTCTTGTTCTCAGTTTGAATTTGATCCTCAGTCACTAAGTGGCGTTTCAAAGCATGTGAAATCATTTCAAGACTCTATCCCTATGGCAATACCTTCAAACAATACTACACATAGAAATATTGGTCCTCTTGGCCCTTTCACTGGATATGCTACCATTCTCAAGTGTTCAAGGTTCTTGAAGCCTTGCCAGGAGCTTTTAGATCAATTTTGCTCACCATGTCGAGGACTCAGTGCTTCTACTTCTGCTGATGTTGATGAAGATTGGGTTGCTGATGAAAAACGTGGCATTTCAGGTGCTTCAGCCTCTACCTTGTTCTATAATTCACACGAAGATACTGCTGCTGATGGTGGAGCCTTGAGTATCTTCTGTATTTCTTCTCGGCCGGAGAGCCAAATGAATAAGGCAAATCTACTGTTCATGCAAGAAGAGAACTCTATGGCTGATACTAATCCGAATTATGATTTATGGAAATGCTTTGCACTGGTCCATAATAAGGTTACAAGGAGGTACAAGCAATATCATCAACAAATGCAAATGGTGGTTTCGTCCTTCGAATCAGTCGCGGGTCTTAGTTCTGCTACCCCTTACATCTCCTTGGCTCTCAAATCAGTATCAAAACATTTCAGATGCCTTAAAAATGGTATCTCAAACCAGGTCAAGCTTGTATGTGAAGTCTTGGGAGAGGATTCACTCATACCAACCACTAGTACTACTAATACTAGTAGTGGTAAATTTGACACTAACATTGCAAGACTAAGGTGCATGGACCAAAGCTCTCAAAAGAACAAATCTGGTGGAAGTAACATGGACATGATTGAACCACAACAACACTTGTGGAGGCCACAAAGAGGCTTACCGGATCGTGCAGTGGCAATACTTAAAGCTTGGTTGTTTGAACATTTTCTTCATCCGTACCCCACGGACACTGATAAACACATGTTGGCTTCTCAAACAGGTCTCTCACGAAACCAGGTATCAAATTGGTTTATCAATGCACGAGTTCGTGTGTGGAAGCCAATGGTTGAGGAAATACACAACCTTGAAACAAAAGGCACGACAACACGTGCAAACCAAAATCCTAGTAAAAATGAGGGAATATGTCGTGCTTCTGAAGGTAGCAGCAGCCGCAAGTTTGGAGAAAAGGGTTTTTTAAATGAAGAACAACATCGGAATCTAGAGAAACGGTCTAAATTTGAGATTACATCAAACATGGAAGGAACACTGATGAGTTTTCCACCGTATCGACATGGTGGTGGTGGACTTGGATCTGTATCACTAACTTTGGGTTTGATGCATGACGTTGAAGGTGTGCAGCACCAACCGTTACAGCAGGAGCAGGATCAGGAGCATCAATTTAGGGGTCATTTTGGAGGGCACATGATCCATGATTTCGTGGATTGA 2193 0.4109 MSSLRPELHVAQQLRRDKLRINETSSSQHQHLQQEFPNNLEQYLSLHPEFNLDLLQARDNNNVRNADMLDEAPLYSSEMIPPHQYTSFPHSSSTIIHSSPKQQCGNWMVNHGSTSSVANQSHNLNSIVPFELNNNMSTHQQQYDHKPSFNTNIVVTDAQSSSPSLYQNALQDIFKSSSISAHTSEMDSLKKNHGIWGGNASESVLYIPSYANQANMWTNQNSFNDKMTNGPQQQQQQKHTRNVFSDSKNPQGLSLSLSSNSQSNSCSQFEFDPQSLSGVSKHVKSFQDSIPMAIPSNNTTHRNIGPLGPFTGYATILKCSRFLKPCQELLDQFCSPCRGLSASTSADVDEDWVADEKRGISGASASTLFYNSHEDTAADGGALSIFCISSRPESQMNKANLLFMQEENSMADTNPNYDLWKCFALVHNKVTRRYKQYHQQMQMVVSSFESVAGLSSATPYISLALKSVSKHFRCLKNGISNQVKLVCEVLGEDSLIPTTSTTNTSSGKFDTNIARLRCMDQSSQKNKSGGSNMDMIEPQQHLWRPQRGLPDRAVAILKAWLFEHFLHPYPTDTDKHMLASQTGLSRNQVSNWFINARVRVWKPMVEEIHNLETKGTTTRANQNPSKNEGICRASEGSSSRKFGEKGFLNEEQHRNLEKRSKFEITSNMEGTLMSFPPYRHGGGGLGSVSLTLGLMHDVEGVQHQPLQQEQDQEHQFRGHFGGHMIHDFVD 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0302 730 MobiDBLite consensus disorder prediction 614 654 - -
Lal2g0302 730 Pfam Homeobox KN domain 560 599 IPR008422 GO:0003677|GO:0006355
Lal2g0302 730 Gene3D - 546 608 - -
Lal2g0302 730 MobiDBLite consensus disorder prediction 614 634 - -
Lal2g0302 730 SMART prehox3 311 481 IPR006563 -
Lal2g0302 730 SUPERFAMILY Homeodomain-like 545 610 IPR009057 -
Lal2g0302 730 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 39 698 - -
Lal2g0302 730 SMART HOX_1 543 607 IPR001356 GO:0003677
Lal2g0302 730 Pfam Associated with HOX 317 480 IPR006563 -
Lal2g0302 730 ProSiteProfiles 'Homeobox' domain profile. 540 603 IPR001356 GO:0003677
Lal2g0302 730 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 39 698 - -
Lal2g0302 730 MobiDBLite consensus disorder prediction 221 260 - -
Lal2g0302 730 CDD homeodomain 543 604 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0302 Lal-Chr2 1777878 1782884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0302 419 694 Homeobox Transcription Factor Family AT4G34610 45.070 5.80e-66 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lal2g0302 POX 1.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0302 - - lang:109351685 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0302 2 1777878 1782884 Lal2g0302 2 1777878 1782884 ECH
Lal25g0192 25 1291563 1295496 Lal2g0302 2 1777878 1782884 PCT
Lal10g1226 10 18599503 18605023 Lal2g0302 2 1777878 1782884 PCT
Lal2g0302 2 1777878 1782884 Lal25g0192 25 1291563 1295496 PCT
Lal2g0302 2 1777878 1782884 Lal10g1226 10 18599503 18605023 PCT