Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0300 ATGAAGCTGGAGCTCAAATTTGTTTTTGCTTTTGTTATTAGCTTGCTCTGGATTCAGCATTCACTCTGTGATAAACCTTCTAATAATACATCTGTTCTAAGCCAGTGGAAATGTAGATGTTCTTCCTTCCCAGGGAATCAAAGCTTTTCTCTTGCTAATTGCTCTAAGTCATGTGATTGCCATTCTGAGGAGAGTGCATCCATATGGATATGCATATGTGACCGTGACGGGTTTCCCCGAGTGGCAGCAGATGGTCATAGCCCTAAATGCTTTACTGCCTGCAACTGCACCTCGGGAACTGTCAGCATGTCACTCGGTTCAAGCAAACACATTTCCGGTAGAACTGTTGTAATTATTATATTAACATGTGTTTTGTGCACAAGCATTGTGTTTATGGCCTCGGTTATAATTTATGTCTACCGAAGATACAAATGTCCTATTCAATCACCAATATTCTCATCAGATAAGGAGACAAGTGGTAGATGCTTTCCGAAAGCCTCTTTTATGTTTGGGAGACAAAAAGAAACTTTTCATGGAAATATTATTCAATTTTCGTTTGATGAACTAGTGAATGCCACTGAAAGCTTTTCAGCCTCCAACCTAATTGGACTAGGTGGAAGTAGTTATGTATACCATGGTCGGCTGAAAGATGGTAGTGATGTGGCAGTTAAGCGACTAAAAGATCAAGGAGGGCCAGACGCAGACTCTAAATTTTTCAATGAGATTGAACTATTCTCTAGACTTCATCATTGTCATGTTGTACCTTTGCTTGGATACTGCTCAGAATTAAAAGGAAGACTTGTTCAGAGGTTACTAGTATTTCAGTACATAATTAATGGGAATTTGAGGGACTGTTTGGATGGAGTTTCTGGACAAAATTTGGATTGGTCTGCTCGTGTTGCAATTGCAATAGGAGCTGCAAGGGGCTTGGAATATCTCCATGAAGCAGCTGCTCCAAAAATTCTTCACAGAGATGTCAAATCATCAAACATTCTTGTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCCAAAAGCTTGAGATCTGATGACCTCCCCAGCTGTTCAAACTCTCCAGCTAGAATGCAGGGAACATTTGGCTATTTCGCACCCGAGTATGCTATCGTCGGGAGAGCCTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTATCAGTGGTCGCCATCCCATCCATAAATCTACAGGCAAAGAAGAAAGCCTTGTTATATGGGCGGTTCCACGTTTACGGGATAGTAGGCGAGTCATAACGGAGTTGGTTGATCCAAAATTGAACGGAAATTTCCCAGAAGAAGAGGTGCAAATAATGGCATACTTAGCAAAGGAATGTTTACTGTTGGATCCTGACACTAGACCAACCATAAGTGAGGTTGTTCAAGTTCTTTCTAGTATCTCCCCAGGCAAATCTTGGAGTAGAAGAAAAATTTCAGCGAATCTGTTTCAGGAACATGAGGATACAGAGAAGCAAAGGCAAGGTCATAGTTCATTGACACTGGATATTAATCACAAAAATAAAGAAGCAGCTGAGCATGAAGAGAATTTTCTCTTGACTTCTAAAACTGAATGCTGGCATGCATCAGAAGAGGAAATTGTGGACCTAACTGAGCCACGGTTTGAATCATTTTGCATGACAAATATCCACTCCCCTTGA 1692 0.4102 MKLELKFVFAFVISLLWIQHSLCDKPSNNTSVLSQWKCRCSSFPGNQSFSLANCSKSCDCHSEESASIWICICDRDGFPRVAADGHSPKCFTACNCTSGTVSMSLGSSKHISGRTVVIIILTCVLCTSIVFMASVIIYVYRRYKCPIQSPIFSSDKETSGRCFPKASFMFGRQKETFHGNIIQFSFDELVNATESFSASNLIGLGGSSYVYHGRLKDGSDVAVKRLKDQGGPDADSKFFNEIELFSRLHHCHVVPLLGYCSELKGRLVQRLLVFQYIINGNLRDCLDGVSGQNLDWSARVAIAIGAARGLEYLHEAAAPKILHRDVKSSNILVDENWQAKITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIHKSTGKEESLVIWAVPRLRDSRRVITELVDPKLNGNFPEEEVQIMAYLAKECLLLDPDTRPTISEVVQVLSSISPGKSWSRRKISANLFQEHEDTEKQRQGHSSLTLDINHKNKEAAEHEENFLLTSKTECWHASEEEIVDLTEPRFESFCMTNIHSP 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0300 563 Gene3D Transferase(Phosphotransferase) domain 1 278 501 - -
Lal2g0300 563 CDD STKc_IRAK 202 478 - -
Lal2g0300 563 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 160 - -
Lal2g0300 563 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 162 557 - -
Lal2g0300 563 SMART serkin_6 196 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0300 563 PANTHER OS01G0253100 PROTEIN 2 160 IPR045271 GO:0004714|GO:0006468
Lal2g0300 563 PANTHER OS01G0253100 PROTEIN 162 557 IPR045271 GO:0004714|GO:0006468
Lal2g0300 563 Gene3D Phosphorylase Kinase; domain 1 169 276 - -
Lal2g0300 563 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Lal2g0300 563 ProSiteProfiles Protein kinase domain profile. 196 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0300 563 Pfam Protein kinase domain 198 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0300 563 SUPERFAMILY Protein kinase-like (PK-like) 177 475 IPR011009 -
Lal2g0300 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0300 Lal-Chr2 1758125 1767825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0300 1 560 Receptor kinase-like Gene Family AT2G28250 49.915 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lal2g0300 Pkinase 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0300 - - lang:109351663 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0300 2 1758125 1767825 Lal2g0300 2 1758125 1767825 ECH
Lal25g0189 25 1255707 1260723 Lal2g0300 2 1758125 1767825 PCT
Lal2g0300 2 1758125 1767825 Lal25g0189 25 1255707 1260723 PCT