Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0294 ATGGCTATGGCTGTGGCTCATCATAGAGAGAATAGCAGTAATAACAGTGGTAGCATTGACAAGCACCTTGATTCAATTTCTGGGAAGTATGTAAGGTACACTGCTGAACAAGTTGAAGCTTTGGAAAGAGTTTATGCTGAGTGTCCCAAACCTAGCTCCCTAAGGAGGCAACAGTTAATCAGAGAGTGCCCCATTCTTTCTAATATTGATCCAAAGCAAATCAAGGTTTGGTTCCAGAATAGAAGGTGTAGAGAGAAGCAAAGAAAAGAAGCTTCACGGCTTCAGACTGTGAACCGGAAGCTTTCAGCAATGAACAAGTTGTTGATGGAGGAGAATGACCGGTTGCAGAAACAGGTGTCACAGCTTGTGTGTGAGAATGGTTTTATGAGGCAGCAATTGCATACTACACCAGCAGCAACTACAGATGCTAGTTCTGATTCAGTGGTTACCACTACTCAGCATTCTATGAGAGATGCTAATAACCCTGCTGGACTCCTATCAATTGCAGAAGAGACCTTGACAGAGTTCCTTTCCAAGGCTACAGGAACGGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCTATTTCACAAAGTTGCGGTGGAGTGGCAGCTAGAGCCTGCGGTCTTGTTAGTTTAGAACCTATGAAGATTGCGGAGATCCTAAAAGATCGTCTATCTTGGTTTCGGGAATGTCGGAGCCTAGAAGTTTTCACAATGTTCCCTGCTGGAAATGGAGGGACCATTGAACTTGTTTACACACAGACATATGCTCCAACAACTCTGGCTCCTTCCCGGGATTTCTGGACTCTGAGATACACTACAACTTTGGAAAATGGCAGTATCGTGGTTTGTGAGAGGTCACTGTCTGGTACTGGCACTGGCCCTAATCCAGCTGCCGCTGCTCAGTTTGTGAGGGCTGAAATGTTCCCCAGTGGATACTTGATTCGACCGTGTGAGGGTGCAGGGTCAATTATCCACATTGTGGACCACCTAAATCTTGAGGCACAGAGTGCACCAGAAGTGTTGCGACCACTCTATGAATCATCAAAAGTGATAGCTCAGAAAATGACAATTGCAGCACTCCGGTATATTAGGCAAATAGCTCAAGAAACAAGTGGTGAAGTGGTATATGGTTTGGGTAGGCAGCCAGCTGTACTGCGCACTTTCAGCCAAAGATTAAGCAGAGGCTTCAATGATGCTGTAAATGGATTCAATGATGATGGATGGACTATAGTGAATTGTGATGGTGCTGAGGATGTAATTATTGCAGTTAATCCAGCCAAGTATTTGAATGGCACCTCAAATTCAGCAAGTTCCCGTGCATTCCTTGGAGGAGTTCTCTGTGCAAAAGCTTCTATGCTGCTCCAAAATGTCTCTCCTGCAGTTTTGGTTCGCTTTCTGAGGGAGCATCGCTCAGAGTGGGCTGATTTTAATGTTGATGCTTATGCTGCCGCATCACTGAAAGCTGACACTTACGCATGTCCAGGAATGAGGCCTACTAGATTTACCGGCAATCAAATAATCATGCCCCTTGGCCATACCATTGAACATGAAGAGATGCTTGAAGTTATCCGACTTGAAGGCCACTCTCTTGCTCAAGAAGACACTTTTGTTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGAGTTGATGAGAATGCTATTGGGGCTTGTTCTGAGCTCATATTTGCTCCAATTGATGAAATGTTCCCTGATGACGCTCCGTTGGTGCCTTCTGGATTTCGCATTATTCCATTGGCTTCAAAACAAGGTGATAAAAAAGTTCAGACTCTGGGTTTGACATCTGGTCTTGAAGTGGTCCCAATGACAGTTCATGGTGCAGATGCATCTAATCAAAACACTCGATCAGTGTTGACTATCGCCTTCCAGTTTCCTTTTGACAGAAATTTGCAAGATAATGTTGCTATTATGGCTCGTCAATATGTCCGCAGTGTAATTTCCTCTGTGCAGAGGGTTGCCATGGCTATTTCTCCATCTGGTATAAGCCCGGGTGTTGGAGCAAAACTTTCTCATGGTTCTCCAGAAGCTCTTACACTAGCTCAGTGGATCTGCCTGAGTTATAGGCAATTCACTTCACGATGTGATTTTTCCTATCATGCTATTATTCGTATTAAATTATTCACTTATCATTTGGGAACTGACTTACTGAGATCAGATTCTCTTGTTGGTGACTTGATGCCGAAACATCTTTGGCATCATCAGGATGCCATTTTGTGCTGTTCAGTGAAGTTGCTGCCTTTGTTCATCTTTGCAAATCAAGCTGGACTTGACATGTTGGAAACAAGTCTAGTAGCTTTACAAGACATCACGCTCGATAAAATATTTGATGAGTCTGGACGCAAGACATTATACGCAGGCTTTGCCAAGTTAATGGAGCAGGGGTTTGCTTATTTGCCAGGTGGGATATGCATGTCGACGATGGGGAGGCATGTTTCTTATGAGCAAGCCATAGCATGGAAAGTATTTAATGCAGAAGATAACACTGTTCATTGCTTGGCTTTCTCTTTCATAAATTGGTCATTTGTATGA 2583 0.441 MAMAVAHHRENSSNNSGSIDKHLDSISGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIDPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTTPAATTDASSDSVVTTTQHSMRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPMKIAEILKDRLSWFRECRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPSRDFWTLRYTTTLENGSIVVCERSLSGTGTGPNPAAAAQFVRAEMFPSGYLIRPCEGAGSIIHIVDHLNLEAQSAPEVLRPLYESSKVIAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTIVNCDGAEDVIIAVNPAKYLNGTSNSASSRAFLGGVLCAKASMLLQNVSPAVLVRFLREHRSEWADFNVDAYAAASLKADTYACPGMRPTRFTGNQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDTFVSRDIHLLQICSGVDENAIGACSELIFAPIDEMFPDDAPLVPSGFRIIPLASKQGDKKVQTLGLTSGLEVVPMTVHGADASNQNTRSVLTIAFQFPFDRNLQDNVAIMARQYVRSVISSVQRVAMAISPSGISPGVGAKLSHGSPEALTLAQWICLSYRQFTSRCDFSYHAIIRIKLFTYHLGTDLLRSDSLVGDLMPKHLWHHQDAILCCSVKLLPLFIFANQAGLDMLETSLVALQDITLDKIFDESGRKTLYAGFAKLMEQGFAYLPGGICMSTMGRHVSYEQAIAWKVFNAEDNTVHCLAFSFINWSFV 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0294 860 SMART HOX_1 26 92 IPR001356 GO:0003677
Lal2g0294 860 Gene3D - 204 383 IPR023393 -
Lal2g0294 860 SMART START_1 167 377 IPR002913 GO:0008289
Lal2g0294 860 CDD START_ArGLABRA2_like 162 378 - -
Lal2g0294 860 Coils Coil 94 125 - -
Lal2g0294 860 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 860 IPR044830 GO:0003700
Lal2g0294 860 SUPERFAMILY Bet v1-like 167 379 - -
Lal2g0294 860 ProSiteProfiles START domain profile. 158 386 IPR002913 GO:0008289
Lal2g0294 860 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 860 - -
Lal2g0294 860 Pfam START domain 168 375 IPR002913 GO:0008289
Lal2g0294 860 ProSiteProfiles 'Homeobox' domain profile. 24 88 IPR001356 GO:0003677
Lal2g0294 860 CDD bZIP 81 120 - -
Lal2g0294 860 SUPERFAMILY Homeodomain-like 28 91 IPR009057 -
Lal2g0294 860 MobiDBLite consensus disorder prediction 1 21 - -
Lal2g0294 860 CDD homeodomain 29 89 IPR001356 GO:0003677
Lal2g0294 860 Gene3D - 23 95 - -
Lal2g0294 860 Pfam MEKHLA domain 725 859 IPR013978 -
Lal2g0294 860 Pfam Homeodomain 29 87 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0294 Lal-Chr2 1715841 1722852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0294 1 860 Homeobox Transcription Factor Family AT5G60690 77.408 0.0 1371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal2g0294 START 1.5e-44 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0294 K09338 - gmx:100813804 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0294 2 1715841 1722852 Lal2g0294 2 1715841 1722852 ECH