Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0292 ATGACTAAGGATGTTGAGGTTCAAGAGCATAAAGGAGGAGGAGGAGAGTACTCTGCTAAGGACTACCAAGACCCACCACCAGCACCGTTGTTTGATTTGGATGAGTTGACAAAGTGGTCTTTATATAGAGCAGTCATAGCTGAGTTCATAGCAACACTTCTGTTCCTTTACATAACCATCTTAACCATTATTGGCTACAATAGTCAGACTGATAAGATCAAAGGTGGTACTGAATGTGATGGAGTTGGTCTTTTGGGTATTGCTTGGTCCTTTGGTGGCATGATTTTCATCCTTGTTTACTGCACCGCTGGAATTTCTGGAGGACACATAAACCCAGCAGTAACATTTGGGCTATTGGTGGGACGCAAGGTGTCACTGATAAGGGCGTTGTTGTACATAATAGCACAGAGTGCTGGTGCTATTTGTGGAGCTGGACTAGTGAAGGGGTTCCAAAGATCATACTTTGATAGGTATGGAGGTGGTGCTAACTTTGTTCAACCTGGCTACAACAAAGGCACCGCTTTGGGTGCTGAGATTATTGGTACCTTTGTTCTTGTCTACACTGTCTTCTCTGCCACTGATCCTAAGAGAAATGCTAGAGACTCCCATGTTCCTGTATTGGCACCACTACCCATTGGATTTGCTGTGTTCATGGTTCACTTGGCTACAATCCCAGTTACTGGTACTGGCATCAACCCAGCAAGAAGTTTTGGATCTGCTGTCATTTACAACAAGGAGAAAATCTGGGATGACCATTGGATTTTCTGGGTTGGACCACTTATTGGAGCATTTGCAGCTGCAGTGTACCACCAATACATTCTTAGAGCAGCAGCCATCAAAGCTTTTGGATCATTCAGGAGCAACAATTAA 870 0.4414 MTKDVEVQEHKGGGGEYSAKDYQDPPPAPLFDLDELTKWSLYRAVIAEFIATLLFLYITILTIIGYNSQTDKIKGGTECDGVGLLGIAWSFGGMIFILVYCTAGISGGHINPAVTFGLLVGRKVSLIRALLYIIAQSAGAICGAGLVKGFQRSYFDRYGGGANFVQPGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGSAVIYNKEKIWDDHWIFWVGPLIGAFAAAVYHQYILRAAAIKAFGSFRSNN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0292 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 288 IPR034294 -
Lal2g0292 289 ProSitePatterns MIP family signature. 109 117 IPR022357 -
Lal2g0292 289 CDD MIP 43 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal2g0292 289 TIGRFAM MIP: MIP family channel proteins 47 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal2g0292 289 Gene3D Glycerol uptake facilitator protein. 28 289 IPR023271 -
Lal2g0292 289 MobiDBLite consensus disorder prediction 1 17 - -
Lal2g0292 289 Pfam Major intrinsic protein 35 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal2g0292 289 PANTHER AQUAPORIN PIP2-7 1 288 - -
Lal2g0292 289 SUPERFAMILY Aquaporin-like 35 275 IPR023271 -
Lal2g0292 289 MobiDBLite consensus disorder prediction 1 23 - -
Lal2g0292 289 PRINTS Major intrinsic protein family signature 43 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal2g0292 289 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal2g0292 289 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal2g0292 289 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal2g0292 289 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal2g0292 289 PRINTS Major intrinsic protein family signature 253 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0292 Lal-Chr2 1697540 1706404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0292 1 287 Major Intrinsic Protein MIP AT5G60660 77.003 1.31e-165 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0292 K09872 - gmx:100818032 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0292 2 1697540 1706404 Lal2g0292 2 1697540 1706404 ECH
Lal2g0292 2 1697540 1706404 Lal9g0270 9 1675756 1677887 ECH
Lal20g0093 20 588654 591908 Lal2g0292 2 1697540 1706404 ECH
Lal1g1816 1 20519335 20521969 Lal2g0292 2 1697540 1706404 ECH
Lal1g0379 1 2294033 2296218 Lal2g0292 2 1697540 1706404 LSH
Lal2g0292 2 1697540 1706404 Lal9g0270 9 1675756 1677887 LSH