Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0270 ATGATTTCCCTTTATAAAACCTCAAGCTTTGGCTTCCAAACAAACCCCACCCACCCCCACTCTACCCTTCTTTCTACCTTTGTGGCTCTAAAACACACAAAGAAGAAGCCAAACATAAAGAAACAAAAAAAGCTGAGCAATATGGAGAGTTGTGACACAAACACCCTTGTTTCTAATTCCTTGTCTTCCCTTCCAGTTACTCCTCAAGTTGTTTTGAGCCCTTGTGCTGCCTGCAAGATTTTGAGAAGAAGATGTGCTGAGAAATGTGTGTTGGCACCTTATTTCCCTCCCACTCAACCTTCTAAATTTATCATTGCCCATCGTGTCTTTGGTGCCAGCAACATCATCAAGTTCTTACAGGAACTTGAAGAATGTCAAAGAGCTGATGCAGTGAACAGCATGGTTTATGAGGCTAGTGCAAGAATTAGAGACCCAATTTATGGTTGTGCAGGTGCAATTTGCCACCTCCATAATCAGGTCAATGAGCTTCAAGCACAATTAGCCAAAGCACAAGCTGAGATTGTAAACATGCAAGTTCAGCAAACTAATCTTATGAATCTAATATGCATGGAAGCAGCACAGGAATTATCACCACAACAATCAGTGGATAATTTCATTTCAAGTAGTACTAATTTCTATGAGGAGAACACTAGTAGCCTATTATGGGAGCCTCTTTGGACATGA 684 0.4094 MISLYKTSSFGFQTNPTHPHSTLLSTFVALKHTKKKPNIKKQKKLSNMESCDTNTLVSNSLSSLPVTPQVVLSPCAACKILRRRCAEKCVLAPYFPPTQPSKFIIAHRVFGASNIIKFLQELEECQRADAVNSMVYEASARIRDPIYGCAGAICHLHNQVNELQAQLAKAQAEIVNMQVQQTNLMNLICMEAAQELSPQQSVDNFISSSTNFYEENTSSLLWEPLWT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0270 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 57 216 - -
Lal2g0270 227 ProSiteProfiles LOB domain profile. 73 174 IPR004883 -
Lal2g0270 227 Coils Coil 160 180 - -
Lal2g0270 227 Pfam Lateral organ boundaries (LOB) domain 74 171 IPR004883 -
Lal2g0270 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 57 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0270 Lal-Chr2 1572536 1573600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0270 69 227 AS2 family AT1G07900 69.325 6.69e-78 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal2g0270 LOB 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0270 - - lang:109353012 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0270 2 1572536 1573600 Lal2g0270 2 1572536 1573600 ECH
Lal1g0365 1 2212661 2216475 Lal2g0270 2 1572536 1573600 LSH
Lal25g0169 25 1085787 1086949 Lal2g0270 2 1572536 1573600 PCT
Lal10g1242 10 18701158 18702940 Lal2g0270 2 1572536 1573600 PCT
Lal8g0133 8 924099 925621 Lal2g0270 2 1572536 1573600 PCT
Lal2g0270 2 1572536 1573600 Lal25g0169 25 1085787 1086949 PCT
Lal2g0270 2 1572536 1573600 Lal10g1242 10 18701158 18702940 PCT
Lal2g0270 2 1572536 1573600 Lal8g0133 8 924099 925621 PCT