Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0266 ATGGACGGTGTGGGAGATTTTGCGGCAGTTCCAACGCATGGAGGACAGTTTATTGAGTATAATATATTCGGTAATCCGTTCGAAGTTACCTCCAAGTATCGTCCTCCGATCATGCCTGTTGGTCGCGGCGCCTACGGAATTGTTTGCTCGCTATTGAATACGGAGACTAATGAGTTGGTGGCGATTAAGAAGATAGCAGATGCTTTTGATAATCACATGGACGCTAAGCGAACGCTACGTGAGATTAAACTTCTTAGGCATTTGAATCATGAAAATATAATTAGTTTAAGAGATGTTATTCCTCCACCTTTGCGTAGAGAGTTTACTGATGTCTACATAGTCACTGAACTTATGGATACTGATCTTCACCACATTATTCGCTCCAATCAAAATCTGTCAGAGGAACACTGCCAGTACTTCTTGTATCAAGTTCTTCGTGGATTAAAGTATATACATTCTGCAAACATAATCCACAGAGATTTGAAACCAAGCAACCTGTTGGTGAATGCAAATTGCGACTTGAAGATTATTGATTTTGGTCTGGCGCGACCAGCCTTAGAAAGTGACTTCATGACTGAATATGTTGTCACAAGATGGTATAGGGCTCCAGAGTTATTGTTGAACTCATCTGATTACACTTCTGCAATAGATGTGTGGTCTGTTGGTTGCATCTTTATGGAGCTTATGAATAAAACGCCTCTGCTTCCCGGTAATGATCATGTACATCAGATGCGCCTATTGACAGAGCTTCTTGGCACTCCAAAAGAGGATGACCTGGGGTTAGTGAGAAATGAGGATGTGAGAAGATATATCCGACAACTTCCTCAATATCCTCGCCAACCTTTAGCTGAGGTCTTCTCTCATGTTCACCCCTTAGCCATGGATCTCGTTGATAAAATGTTGACAATTGATCCAAGTAAAAGAATTACAGTTGAAGAAGCTCTAGCCCATCCATACCTTGCAAAACTGCATTGTGAGGGTGATGAACCAGTCAGCATGGAGCCATTCTCATTTGAATTTGAGCACCAACAATTGGATGAAGAGCAGATAAAAGAGATGATTTACAGGGAAGCTTTGGCACTCAATCCTGAGTATGCTTAA 1101 0.416 MDGVGDFAAVPTHGGQFIEYNIFGNPFEVTSKYRPPIMPVGRGAYGIVCSLLNTETNELVAIKKIADAFDNHMDAKRTLREIKLLRHLNHENIISLRDVIPPPLRREFTDVYIVTELMDTDLHHIIRSNQNLSEEHCQYFLYQVLRGLKYIHSANIIHRDLKPSNLLVNANCDLKIIDFGLARPALESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKTPLLPGNDHVHQMRLLTELLGTPKEDDLGLVRNEDVRRYIRQLPQYPRQPLAEVFSHVHPLAMDLVDKMLTIDPSKRITVEEALAHPYLAKLHCEGDEPVSMEPFSFEFEHQQLDEEQIKEMIYREALALNPEYA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0266 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 365 - -
Lal2g0266 366 ProSitePatterns MAP kinase signature. 69 172 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal2g0266 366 Gene3D Phosphorylase Kinase; domain 1 17 357 - -
Lal2g0266 366 Pfam Protein kinase domain 39 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0266 366 ProSiteProfiles Protein kinase domain profile. 34 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0266 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 365 - -
Lal2g0266 366 Gene3D Transferase(Phosphotransferase) domain 1 118 347 - -
Lal2g0266 366 SUPERFAMILY Protein kinase-like (PK-like) 39 326 IPR011009 -
Lal2g0266 366 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
Lal2g0266 366 SMART serkin_6 34 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0266 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0266 Lal-Chr2 1550815 1559261 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0266 6 366 MAP Kinase Gene Family AT3G45640 81.440 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal2g0266 Pkinase 5.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0266 K20536 - gmx:100801339 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0266 2 1550815 1559261 Lal2g0266 2 1550815 1559261 ECH
Lal1g0362 1 2173220 2176879 Lal2g0266 2 1550815 1559261 LSH