Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0257 ATGTATACTCACTATAATACCACAATTTCACGCGCTGCCGATTCCATGAGCCATGTTCCATCACCTCAAGATGCTACGACGGCATCAGCAATGCACTTCTCCACCAATCTTCAGAAGCAGCAGTACCATCTGGGTCTGGGCGAGTTGGACATGGTGCAACTCAACTCGGAGATGAGTTATAATAATCAGAATAGCAGTGGGAGTGGAGGAAGCAGCTACATGGGTTCACCGAGTTCGATGGCGAGTTACGAGACTCAGCGGTTGATGCAGAGGAGCGTTAGCAGCCACTCGCTACAGAAAACAAATAATAATGGGCCCCACAATGCCTTTTCAGCTTTCTTTGCTGAGTTGCTTGAATCCTCCCATCATGATGGTCCGGTGAGGAGAGTTTACAGTACCGGTGATCTCCATAGAATTAATGGAATGCAACATTATCATCATTCAGATAGTCCATTATCAAGTGAAAGTAGTATGATCATAGAAGGAATGAACAGAGCCAGTCCTTATAGCCCAGAGGAGAAGAAGGCGAGGATTGAGAGATACAAAACCAAGAGAAACCAGAGGAACTTCAACAAGAAAATTAAGTATGCTTGCAGGAAAACATTAGCAGATAGCAGGCCACGTATTAGAGGAAGATTTGCAAGGAATGATGAAATTGTAACCAACCCTCATGTTCAATGGAGCCATATTATTGGTGATGGAGAGGAAGCTGATGATGAAGATGAGAATTGGGACAATTTCTTTAATACCATAGTTCCTGAAAGTCTGGATCATGAGCCCCATTGCAGTAACGCTTTTGATGTATTATATTAA 813 0.4342 MYTHYNTTISRAADSMSHVPSPQDATTASAMHFSTNLQKQQYHLGLGELDMVQLNSEMSYNNQNSSGSGGSSYMGSPSSMASYETQRLMQRSVSSHSLQKTNNNGPHNAFSAFFAELLESSHHDGPVRRVYSTGDLHRINGMQHYHHSDSPLSSESSMIIEGMNRASPYSPEEKKARIERYKTKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIVTNPHVQWSHIIGDGEEADDEDENWDNFFNTIVPESLDHEPHCSNAFDVLY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0257 270 Pfam CCT motif 175 216 IPR010402 GO:0005515
Lal2g0257 270 MobiDBLite consensus disorder prediction 59 99 - -
Lal2g0257 270 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 27 270 IPR045281 GO:0009909
Lal2g0257 270 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
Lal2g0257 270 PANTHER CCT MOTIF PROTEIN 27 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0257 Lal-Chr2 1509116 1512247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0257 162 215 C2C2-CO-like Transcription Factor Family AT5G24930 51.852 1.96e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal2g0257 CCT 4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0257 - - lang:109352757 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0257 2 1509116 1512247 Lal2g0257 2 1509116 1512247 ECH
Lal25g0160 25 1016848 1019147 Lal2g0257 2 1509116 1512247 PCT
Lal2g0257 2 1509116 1512247 Lal25g0160 25 1016848 1019147 PCT