Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0253 ATGCCAAGAAAAGGAATGAGAAGCGTCTTCTACAAACCTTCACCCTTTCCATCATCATCAGTGCCACCTTCGTCTCCTCAACGAACCTTTTCAGATTCTTTAATGCAAGAAAACATCGAAACCGCAGAGTTTCTTATAACCAAATCGGATTCCGTTACTAACCATTCATCATCCTCTTACGCCAAACCTGGCCCTCTCTTCAGTGGCACCCGCTTTGAAGCCAAACAGTACCTTAACGCCGTCAAGGGACTACAAACCGCTATGAAGCACCTGCTCTCACAGGATCCTACCTCCAAAACACTCGTGAGATCACAATTCTTGATGCAACTCGCGATGAAGACGCTTCAGAAAGAGTTATGTCAAATTTTATCTTCAAATAGAGAGCACTTGGATCCAGAAACCGTTTCTAACCGTTCCTCAACTGATACGAGAAGCAGCTTTTCCGATTTCGATGATGAAATCTCTGTCGACAATGAGTTTCGCATTGCCGGAAACTCCATATCTGAGACAGAGAGAATGTCAATGATCGCCATGGCGGATTTGAAGGCCATAGCTGATTGCATGATTTCCTCCGGCTATGGCAAAGAGTGTGTCAAGGTTTACATCACCATGAGAAAATCGATCGTCGATGAAGCTTTGTACCATCTCGGAGTGGAACGGTTGAGCTTCTCTCGGGTTAACAAGATGGACTGGGAGGTAGTTGAGTTGAAGGTCAAGACCTGGTTGAACGCTTTGAAAGTCGCCGTCAGCACTCTTTTTCATGGCGAAAGAATCCTCTGCGATCATGTCTTCGCCGCTGCATTGGAGAAGAGAATCGCGGAGTCATGCTTTGCCGAGATTACAAGAGACAGCACAGCGTTGTTGTTTGGACTCCCGGAAATGGTGGCAAAGTGCAACAAAACTCCTGAGAAAATATTTAAAACTCTGGATTTGTACGAAGCAATATCAGACAATTGGCCTCAAATTGAATCCATATTCTCCTATCAATCAACTTCGAGAGCCCGTTCACTTGCGGTTAATTCAATGGTAAAACTCGGTGATGCCATTCGTGCGATGTTATCGGAGTTCGAATCATCTATCCAGAAGGAATCCTCAAAGGTTCCGGTTCCGGCCGGTGGTGTGCACCCCCTCGCGCGCTACGTTTTGAACTACGTCACGTTCCTCGCCGATTACAGCGGCGTGCTCGGTAATATCATCACTGATTATCCACAATCTCCACTGCCAGAAAATTATTATCGCAGTCCAATGCGCAATGAAAATCCGTTGGTGTCTGATATATCAGAACGAATCGCGTGGTTAATACTAGTCGTGCTCTGCAAAATCGACGCAAAAGCTGAACTATACAACGACGTGGCTCTCTCTTACTTGTTCCTCGTCAATAACATGCAATATGTTGTCGAAAAGGTTCGTAAATCGAACCTAGGGTTCCTTCTTGGGGAAGATTGGTTGACAAAGCACAAATTGAAGGTTGAAGAGTATGTGTCGAAGTATGAACGCGTGGGATGGAGTAAGGTGTTATCGTCTCTTCCGGAAAATCCCACGGCGGAAATGACGGCGGAGCAAGTTAGGGCCTGCTATATGAACTTCAACGCAGCGTTTCAAGAAACGTGCAGAAAACAGTCCGCATGGGTCGTAACAGACCCGAAATTGAGAAAAGAAATTAAAATTTCGATAGGTTCAATCGTAGTGAGCAGGTATAAGAAATTTTACGAGAGGCATAGGTCTGCGTGGGCTCCGGTTAACGGGTTTAAACCCGAGGATATAGGAAATTACTTGTCTGATATTTTGTATGGGATTGGTGACTCATCACATTCTTATTCCACAACGTCGTCGTGTCATCGCTCTAATCGAGGGAGACGCAATCGCTATAGTTTATGA 1878 0.4531 MPRKGMRSVFYKPSPFPSSSVPPSSPQRTFSDSLMQENIETAEFLITKSDSVTNHSSSSYAKPGPLFSGTRFEAKQYLNAVKGLQTAMKHLLSQDPTSKTLVRSQFLMQLAMKTLQKELCQILSSNREHLDPETVSNRSSTDTRSSFSDFDDEISVDNEFRIAGNSISETERMSMIAMADLKAIADCMISSGYGKECVKVYITMRKSIVDEALYHLGVERLSFSRVNKMDWEVVELKVKTWLNALKVAVSTLFHGERILCDHVFAAALEKRIAESCFAEITRDSTALLFGLPEMVAKCNKTPEKIFKTLDLYEAISDNWPQIESIFSYQSTSRARSLAVNSMVKLGDAIRAMLSEFESSIQKESSKVPVPAGGVHPLARYVLNYVTFLADYSGVLGNIITDYPQSPLPENYYRSPMRNENPLVSDISERIAWLILVVLCKIDAKAELYNDVALSYLFLVNNMQYVVEKVRKSNLGFLLGEDWLTKHKLKVEEYVSKYERVGWSKVLSSLPENPTAEMTAEQVRACYMNFNAAFQETCRKQSAWVVTDPKLRKEIKISIGSIVVSRYKKFYERHRSAWAPVNGFKPEDIGNYLSDILYGIGDSSHSYSTTSSCHRSNRGRRNRYSL 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0253 625 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 18 602 - -
Lal2g0253 625 Gene3D Exocyst complex component Exo70 59 603 - -
Lal2g0253 625 SUPERFAMILY Cullin repeat-like 71 595 IPR016159 -
Lal2g0253 625 PANTHER EXOCYST COMPLEX PROTEIN EXO70 18 602 IPR004140 GO:0000145|GO:0006887
Lal2g0253 625 Pfam Exo70 exocyst complex subunit 240 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal2g0253 625 MobiDBLite consensus disorder prediction 605 625 - -
Lal2g0253 625 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0253 Lal-Chr2 1483357 1485234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0253 19 598 EXO70 exocyst subunit family AT5G59730 46.370 1.40e-177 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0253 K07195 - gmx:100810579 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0253 2 1483357 1485234 Lal2g0253 2 1483357 1485234 ECH
Lal2g0253 2 1483357 1485234 Lal9g0243 9 1490250 1492106 LSH