Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal2g0229 | ATGGCAGACGGTGAGGATATTCAGCCACTCGTCTGCGATAATGGAACAGGAATGGTTAAGGCTGGATTTGCTGGAGATGATGCTCCAAGGGCTGTCTTTCCTAGCATTGTTGGTCGTCCACGTCACACCGGTGTGATGGTTGGCATGGGTCAAAAGGATGCATATGTTGGGGATGAAGCTCAATCCAAGAGAGGTATCTTGACTTTGAAATATCCAATTGAGCATGGTATTGTGAGTAATTGGGATGACATGGAAAAGATCTGGCATCACACCTTCTATAATGAACTTCGTGTGGCTCCCGAGGAGCACCCAGTTTTGCTCACTGAAGCACCTCTCAACCCAAAGGCTAATCGCGAGAAAATGACCCAAATTATGTTTGAGACCTTCAACACCCCTGCCATGTATGTTGCCATCCAGGCTGTTTTGTCCCTCTATGCCAGTGGCCGAACAACTGGTATCGTTCTTGACTCTGGAGATGGTGTCAGTCATACTGTTCCCATTTATGAGGGGTATGCTCTCCCTCATGCCATCCTCCGTCTTGACTTAGCAGGACGCGATCTCACTGATGCCTTGATGAAAATTCTTACAGAACGTGGTTATTCCTTCACTACCACAGCTGAGCGTGAAATTGTAAGGGATGTGAAGGAAAAGCTCGCTTATATCGCTCTTGATTATGAGCAAGAGCTTGAAACTTCAAAAACTAGCTCTGCTGTTGAAAAGAGCTATGAGCTGCCTGATGGACAAGTCATCACCATTGGTGCCGAGCGTTTCAGATGTCCCGAAGTCCTCTTCCAGCCATCCATGATCGGAATGGAAGCTGTAGGCATTCATGAGACCACATACAATTCAATTATGAAGTGTGATGTCGATATTAGGAAAGACTTGTATGGAAACATTGTTCTCAGTGGTGGTTCTACCATGTTCCCTGGTATTGCTGACAGAATGAGCAAAGAAATCTCCGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCCCCACCCGAGAGAAAGTACAGTGTCTGGATTGGTGGCTCCATCTTGGCTTCTCTCAGCACTTTCCAACAGATGTGGATTGCAAAGGCAGAGTATGATGAGGCTGGTCCTTCAATTGTACACAGGAAATGCTTTTAA | 1134 | 0.4638 | MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDEAGPSIVHRKCF | 377 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal2g0229 | 377 | ProSitePatterns | Actins and actin-related proteins signature. | 106 | 118 | IPR020902 | - | |
| Lal2g0229 | 377 | SUPERFAMILY | Actin-like ATPase domain | 6 | 155 | IPR043129 | - | |
| Lal2g0229 | 377 | ProSitePatterns | Actins signature 2. | 358 | 366 | IPR004001 | - | |
| Lal2g0229 | 377 | PANTHER | ACTIN | 1 | 376 | IPR004000 | - | |
| Lal2g0229 | 377 | Gene3D | - | 10 | 371 | - | - | |
| Lal2g0229 | 377 | PANTHER | ACTIN-97 | 1 | 376 | - | - | |
| Lal2g0229 | 377 | SUPERFAMILY | Actin-like ATPase domain | 149 | 377 | IPR043129 | - | |
| Lal2g0229 | 377 | CDD | NBD_sugar-kinase_HSP70_actin | 10 | 183 | - | - | |
| Lal2g0229 | 377 | Gene3D | Actin; Chain A, domain 4 | 182 | 273 | - | - | |
| Lal2g0229 | 377 | PRINTS | Actin signature | 28 | 37 | IPR004000 | - |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal2g0229 | 2 | 1335338 | 1338135 | Lal2g0229 | 2 | 1335338 | 1338135 | ECH | |
| Lal2g0229 | 2 | 1335338 | 1338135 | Lal9g0228 | 9 | 1394994 | 1399328 | ECH | |
| Lal1g0325 | 1 | 1973499 | 1976410 | Lal2g0229 | 2 | 1335338 | 1338135 | LSH | |
| Lal2g0229 | 2 | 1335338 | 1338135 | Lal9g0228 | 9 | 1394994 | 1399328 | LSH | |
| Lal25g0146 | 25 | 924109 | 926970 | Lal2g0229 | 2 | 1335338 | 1338135 | PCT | |
| Lal8g0105 | 8 | 747128 | 750555 | Lal2g0229 | 2 | 1335338 | 1338135 | PCT | |
| Lal2g0229 | 2 | 1335338 | 1338135 | Lal25g0146 | 25 | 924109 | 926970 | PCT | |
| Lal2g0229 | 2 | 1335338 | 1338135 | Lal8g0105 | 8 | 747128 | 750555 | PCT |
Showing 1 to 8 of 8 entries