Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0228 ATGGGTAACGGCGTTGGAAAGCTAACCGTGTGTTTCACCGGTAACAGTGGTCGCCGGAAGCATAATGAAACATTCCCTTATATAACGGAGCCACTAGACGAGGGTCTGGGCCACTCTTTCTGCTACGTTAGACCCGACCCGACTCGCTTATCTTCTTCAAAGGTCCACTCTGAAGAAACGACGACGTTCAGAACAATCTCTGGTGCATCGGTGAGTGCTAACACTTCAACCCCACTCTCAACCGCTTTCGTAGATTTATATTCATACGGTTCAATCGATAGAGCCGCGGCTTTCGAATCTTCAACTTCTTTCGCTTCTCTCCCTCTTCAACCAATCCCCAAAGGTTTAATGAACTCGGGTCCCTTCTCCGGTAGCCTAACCGGTTTTCCCGGTTCGGGTCCTCTGGAGAGGGGTTTTTTATCCGGTCCGATAGAGCGTGGGTTCATGTCCGGTCCAATTGAAAAGGATGTTAACTGTTCAGATCAGTTTCAGAGAAGCTTCTCTCATGGTGGACTAGGTTTTGTGTTCAAACCCAGAAAACAAAAGGGTCGGTGGATTCGGCTTCTTCAGAGAGCGATATCGAAGACACTTTCTCGTGGGCAAAACTCAATTGTTGCTCCTATCAAAGGTGTGATTGTGAAGGAACATGATTGGGTTGTTGCTGCTGCAGTGGAGAAGCAGAATCATAACGAGAATTTGACCGTGAATAGTGTGAATTTCAGTTGTGAGGGTAGTTTGGAAGACGATGATTCGATGGAAAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAGGATCGTGTCCACGTGGTGGTTTCTGAGGAACACGGTTGTGTTTTCGTGGGGATTTACGATGGTTTCAATGGTCCTGATGCACCTGATTACCTTCTCTCCAATCTTTACACCTCTGTCCACAAAGAATTGAAGGGGTTGCTTTGGGATGATAATTCTGAACAAGTTGTTGGGAAAGAGAATCAGAATTTGGAAGTTCAAGATGATGATGATGATGGTGATTATTGTTCTCTGTGTTTTGATAATAACAACCGTCCTTGCACAAGTGGTGATGATGCATGCAGGGGAAAGAGGGTCGAGAATTGCAAGAATAAGTACAAAGGTTCTGCGAAGAAATGGGGGGATAATCAGAGAAGGTGGAAGTGTGAATGGGATAGGGAAAGGTTAGAGCTTGATAGAAGAATGAAGGAGCAATTAACTCGATCTGCATCGGATGAGAAGAATATGAATACTAGCTCAATTAACCATTTTGATGTGTTGGAAGCACTTTCCAGGGCTTTGAGGAAAACTGAGGAGTCTTATTTGGATGTTGCTGATAAGATGGTCATGGAGAATCCTGAATTGGCTTTGATGGGTTCGTGTGTGCTAGTGATGTTAATGAAGGGGGAAGATGTTTATGTGATGAATGTTGGTGATAGTAGAGTTGTGTTGGCTCAGAAGGCAGAGCCTGATTATTGGCTTGGGAAAATTAGACAGGACTTGGAGAGGATCAATGAAGAAACCATGAATGATCTTGAATCTTGGGAAGATGCTGATAGATCAAACTTGGTTTCTACTTTAAGCGCTCTTCAGCTTACCAAGGATCATAGTACTAGTGTTCAAGAGGAAGTCCAGAGAATAAAAAAAGAACACCCGGATGATCCTTATGCAGTAGTAAATGATCGTGTTAAGGGTTCTCTGAAGGTCACCCGAGCATTTGGTGCAGGATTTCTCAAACTGCCCAAGTGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTATGTTGGAACTTCTCCTTACATCAGCTGCCAACCATATCTAAAACACCACAGGTTAGGCCCTAAGGACAAATTTTTGATTCTATGCTCTGATGGGCTATATCAATACATGTCAAACGAACAAGCGGTTGCTGAAGTTGAGCTTTTCATCACGTTGCAACCTGAGGGAGACCCTGCACAGCATTTGGTTGAAGAAGTGTTATTTCGTGCAGCAAAGAAAGCAGGTTTGGACTTCCACGAGTTGCTTGAAATTCCACAAGGTGATCGGCGTCGTTACCATGATGATGTTTCCATCATTGTTATCTCTTTGGAAGGAAGGATATGGAGATCATGTGTATAA 2115 0.4416 MGNGVGKLTVCFTGNSGRRKHNETFPYITEPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGSIDRAAAFESSTSFASLPLQPIPKGLMNSGPFSGSLTGFPGSGPLERGFLSGPIERGFMSGPIEKDVNCSDQFQRSFSHGGLGFVFKPRKQKGRWIRLLQRAISKTLSRGQNSIVAPIKGVIVKEHDWVVAAAVEKQNHNENLTVNSVNFSCEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGCVFVGIYDGFNGPDAPDYLLSNLYTSVHKELKGLLWDDNSEQVVGKENQNLEVQDDDDDGDYCSLCFDNNNRPCTSGDDACRGKRVENCKNKYKGSAKKWGDNQRRWKCEWDRERLELDRRMKEQLTRSASDEKNMNTSSINHFDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRVVLAQKAEPDYWLGKIRQDLERINEETMNDLESWEDADRSNLVSTLSALQLTKDHSTSVQEEVQRIKKEHPDDPYAVVNDRVKGSLKVTRAFGAGFLKLPKWNNALLEMFRIDYVGTSPYISCQPYLKHHRLGPKDKFLILCSDGLYQYMSNEQAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0228 704 SUPERFAMILY PP2C-like 263 696 IPR036457 -
Lal2g0228 704 Gene3D - 221 700 IPR036457 -
Lal2g0228 704 ProSiteProfiles PPM-type phosphatase domain profile. 249 695 IPR001932 -
Lal2g0228 704 PANTHER - 20 704 - -
Lal2g0228 704 Coils Coil 496 516 - -
Lal2g0228 704 PANTHER PROTEIN PHOSPHATASE 2C 20 704 IPR015655 GO:0004722|GO:0006470
Lal2g0228 704 CDD PP2Cc 411 695 IPR001932 -
Lal2g0228 704 SMART PP2C_4 250 693 IPR001932 -
Lal2g0228 704 Pfam Protein phosphatase 2C 404 651 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0228 Lal-Chr2 1329875 1333123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0228 1 704 PP2C-type Phosphatase Gene Family AT2G28890 66.620 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0228 - - gmx:100812903 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0228 2 1329875 1333123 Lal2g0228 2 1329875 1333123 ECH
Lal1g0323 1 1961635 1964907 Lal2g0228 2 1329875 1333123 LSH