Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0226 ATGGGTATGGCTAGTGTTGTGTTCTGCATTGCCTCCATTATGTTCACATCAACATGGATGCATGTTGAAGCTCGAATTCCGGGGGTTTACTCTGGTGGTGCTTGGCAAAGTGCTCATGCTACTTTTTATGGTGGATCTGATGCTTCTGGAACCATGGGAGGGGCGTGTGGATATGGGAATCTGTATAGCCAAGGGTACGGTGTGAATACAGCGGCATTGAGTACAGCACTTTTCAACAATGGTCTAAGTTGTGGTGCATGTTTTGAGATCAAGTGTGCAAACGACAGGGAGTGGTGTCACTCTGGAAGCCCTTCTATCTTTATTACGGCAACTAACTTTTGTCCTCCAAACTTCGCTCTTCCAAATGACAATGGAGGATGGTGCAACCCTCCACGACCACACTTTGACCTTGCCATGCCCATGTTCCTTAAGATTGCCGAGTACCGTGCTGGAATTGTCCCTGTTGCCTATCGCCGAACACTAGCTAGGCACTGGAATGGGGTGGCATGCAGAAAACAAGGAGGAATGAGGTTCACCGTAAACGGCTTCCGTTACTTCAACCTGGTTTTGATAACCAATGTCGCGGGTGCAGGGGATATCACACGCGCCTACGTTAAGGGCTCTCGAACCGGTTGGATGCCACTGAGCCGGAACTGGGGTCAGAACTGGCAATCAAACGCGGTTTTGGTGGGTCAGGCCTTGTCGTTTCGTGTCACAGGAAGTGACCGTCGCACTTCCACTTCTTTCAACATTGCTCCCCCTAATTGGCAATTTGGTCAAACTTTCACTGGAAAGAATTTCAGGGTCTAA 810 0.4926 MGMASVVFCIASIMFTSTWMHVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANDREWCHSGSPSIFITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRTLARHWNGVACRKQGGMRFTVNGFRYFNLVLITNVAGAGDITRAYVKGSRTGWMPLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSFNIAPPNWQFGQTFTGKNFRV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0226 269 Pfam Lytic transglycolase 70 157 IPR009009 -
Lal2g0226 269 SMART dpbb_1 70 157 IPR007112 -
Lal2g0226 269 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 53 167 IPR007112 -
Lal2g0226 269 Gene3D - 23 160 IPR036908 -
Lal2g0226 269 PRINTS Expansin signature 65 79 IPR002963 GO:0009664
Lal2g0226 269 PRINTS Expansin signature 92 103 IPR002963 GO:0009664
Lal2g0226 269 PRINTS Expansin signature 106 116 IPR002963 GO:0009664
Lal2g0226 269 PRINTS Expansin signature 125 142 IPR002963 GO:0009664
Lal2g0226 269 PRINTS Expansin signature 221 242 IPR002963 GO:0009664
Lal2g0226 269 PRINTS Expansin signature 250 266 IPR002963 GO:0009664
Lal2g0226 269 Gene3D - 175 267 IPR036749 -
Lal2g0226 269 PANTHER EXPANSIN-A15 5 268 IPR002963 GO:0009664
Lal2g0226 269 Pfam Expansin C-terminal domain 176 253 IPR007117 -
Lal2g0226 269 PANTHER EXPANSIN 5 268 - -
Lal2g0226 269 SUPERFAMILY PHL pollen allergen 172 264 IPR036749 -
Lal2g0226 269 PRINTS Expansin/Lol pI family signature 34 49 IPR007118 GO:0005576
Lal2g0226 269 PRINTS Expansin/Lol pI family signature 52 70 IPR007118 GO:0005576
Lal2g0226 269 PRINTS Expansin/Lol pI family signature 74 92 IPR007118 GO:0005576
Lal2g0226 269 PRINTS Expansin/Lol pI family signature 150 166 IPR007118 GO:0005576
Lal2g0226 269 PRINTS Expansin/Lol pI family signature 212 226 IPR007118 GO:0005576
Lal2g0226 269 PRINTS Expansin/Lol pI family signature 250 264 IPR007118 GO:0005576
Lal2g0226 269 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 185 264 IPR007117 -
Lal2g0226 269 SUPERFAMILY Barwin-like endoglucanases 34 193 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0226 Lal-Chr2 1316141 1317789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0226 12 269 Expansin Gene Family AT2G39700 81.923 5.49e-158 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0226 - - gmx:100809139 498.434