Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0225 ATGGGACTCTGTTTCAGCTCCAAAACTAAAGCTGACACCCCATATACCACTGGGTTAAGTTCAAAAGATGTGAGTAGTGATGAAAAGGATGTCAGCATCCCAAGTAGTAATGTCTCAAGAGTCTTGGTGCCGCAAACTTCGCGGAGCGAGGGTGAAATATTGCAATCATCCAATCTAAAGAGCTTCACTTTAATAGAACTTAAGGCTGCCACCCGAAATTTCCGTCCAGACAGCGTGTTAGGAGTAGGTGGTTTTGGATCGGTGTTCAAGGGCTGGATTGATGAGCAGTCATTGGTTGCTGCAAAACCTGGCACCGGAGTTGTTATTGCTGTTAAAAGACTTAATCAGGATAGCTTTCAAGGTCACCAGGAGTGGTTGGCTGAAGTCAACTATCTAGGCCAACTTTCTTATCATCATCTTGTGAGGTTGATTGGATATTGCCTTGAAGATGAACATCGTCTTCTGGTCTATGAATTTATGCCTCGTGGAAGCTTGGAGAATCATTTGTTCAGGAGTGAGTTCTTGCAGCCCCGTATTTTCACATTACTGAACTTGAGAAGAGTGGTTGACATTAGCAATTTTGTCGTAACAGGAGGGTCATATTTTCAACCTCTTTCATGGAGCCTCCGTTTGAAGGTCGCTCTTGGTGCTGCCAAAGGTCTTGCATTTCTTCACAGTGCTGAAACCAAAGTCATATACCGAGATTTTAAAACTTCAAATATCTTGCTGGATTCAAATTATAATGCAAAACTTTGTGATTTTGGGCTGGCTAAGGATGGACCAACAGGTGATAAAAGTCATGTCTCCACCAGAGTAATGGGAACCTATGGATATGCAGCTCCTGAGTACATAGCCACTGGTCATCTCACTGCAAAGAGTGATGTGTTTAGTTTTGGAGTTGTCCTAATGGAAATGATATCAGGCCTAAAGGCTATTGACAAGAATAGACCATCTGGGCAACAAAGTTTGGTGGAATGGGGTAAGCCATACTTGACCAACAAACGAAAAATGTTGCATGTAATGGATAATAGACTTGAAGGTCAATATTCAATAGATGATGCATTAAAGGTATCTACCCTTGCTCAGAGATGCCTCTCAATAGAGTCCAAGTTGAGGCCAAACATGGATGAGGTTGTTACAGTTTTGGAGCAGCTACAGGTTCCTGATGTAAATGGAGGAAATCGAAGGCGTGCTCGTAGAAGAAGTTCTCATGTATGA 1218 0.4253 MGLCFSSKTKADTPYTTGLSSKDVSSDEKDVSIPSSNVSRVLVPQTSRSEGEILQSSNLKSFTLIELKAATRNFRPDSVLGVGGFGSVFKGWIDEQSLVAAKPGTGVVIAVKRLNQDSFQGHQEWLAEVNYLGQLSYHHLVRLIGYCLEDEHRLLVYEFMPRGSLENHLFRSEFLQPRIFTLLNLRRVVDISNFVVTGGSYFQPLSWSLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLCDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYIATGHLTAKSDVFSFGVVLMEMISGLKAIDKNRPSGQQSLVEWGKPYLTNKRKMLHVMDNRLEGQYSIDDALKVSTLAQRCLSIESKLRPNMDEVVTVLEQLQVPDVNGGNRRRARRRSSHV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0225 405 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Lal2g0225 405 ProSiteProfiles Protein kinase domain profile. 74 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0225 405 PANTHER KINASE 1B 191 403 - -
Lal2g0225 405 PANTHER KINASE 1B 24 177 - -
Lal2g0225 405 PANTHER OS01G0588500 PROTEIN-RELATED 24 177 - -
Lal2g0225 405 PANTHER OS01G0588500 PROTEIN-RELATED 191 403 - -
Lal2g0225 405 MobiDBLite consensus disorder prediction 1 32 - -
Lal2g0225 405 SUPERFAMILY Protein kinase-like (PK-like) 48 382 IPR011009 -
Lal2g0225 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Lal2g0225 405 Pfam Protein tyrosine and serine/threonine kinase 78 381 IPR001245 GO:0004672|GO:0006468
Lal2g0225 405 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Lal2g0225 405 Gene3D Transferase(Phosphotransferase) domain 1 160 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0225 Lal-Chr2 1316141 1322979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0225 52 382 Glycoside Hydrolase AT3G07070 45.181 2.58e-94 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lal2g0225 PK_Tyr_Ser-Thr 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0225 - - gmx:100798404 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0225 2 1316141 1322979 Lal2g0225 2 1316141 1322979 ECH
Lal25g0143 25 893657 896931 Lal2g0225 2 1316141 1322979 PCT
Lal8g0103 8 737095 739824 Lal2g0225 2 1316141 1322979 PCT
Lal2g0225 2 1316141 1322979 Lal25g0143 25 893657 896931 PCT
Lal2g0225 2 1316141 1322979 Lal8g0103 8 737095 739824 PCT