Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0218 ATGGATCCCCTTGTGGAAAACTTTATGAATGGGTTATTTGAAAATAGTCCTATCTCAGTACTTACAAATCAGAACTCAGGAAATGGGTTTAAAGTGGAAGATTCTTCTTCCCCTTCAAACCACTCAGAATCTCCCACCGGTTATGCTCCTTCTACTGTCTCAACAAGCCCAAATGGAGAATCTGCTGATTCTACTAGACATTCCAATCCTATTCTTAGATACATAAGCGATATCCTCATGGATGAAGAAGATGACTTGGAGCGCAAACCCTGCATGTTGCAGGATTGTTTGAAACTCCAGGCTGCTGAAAAATTATTCTATGCCGCGCTCGGTGGAAGTCATCCTTCATTGCCAGACCAAATCCAAGGTTGTCACCAACATGATAGTCCTGACCCTGATGATAATTCAGGTAGAACTACTAGTTGTGACAGCAATAATAGCAGCCACTCCACTGATAATTCCTCATCATATGAATCCGTTTGGGTTAATGGTTCTGGTGATTTTGAGTCTTCATTCATGCATAGCTCTCTACTGGATGATATGGCTATTGGTCCATTTAGAGAGGCACAAGCTCTTGAAACCTGGAATAATATTATTCAGTCTCAGATCAAGCCACATACAATTGCAGCAATCACGGGATCAAGGGAAAAGAGAATCCATCATATGGATGATATCACACATGAAGAAAAAGAGAGAGGGGTCAAGGTTTCTGCTAAATATGTTGATGATTCAGAACCCCCGGAGATGTTTGATGAGGTACTGCTTTGTCAAGATGGAAAAAGCCCTGCCATTTTTTGCACCAATGGTGAACCATCAAAACAAAATGCTGCTGATTCAAGAGCATCAAATAGAAAAGCGACACGTAAGAAGAAAGGTGGCAACAAGGGGACAAGTACAGCTACAACCATAGATTTATGGACTCTTCTAACTCAGTGTGCACAAGCAGTGACAAACTATGACCAAAGGAATGCCAATGCAATACTCAATCAGATTAGGCTACACTCTTCAGCTTTTGGTGATGGACTACAACGGTTAGCTCATTACTTTGCCATTGGTCTTGAGGCCAGATTAGCTGCTGGGACACCAAATTATATGCAACTTCATCTAGCCTCTGCTGCTGATATGTTGAAAGCTTACAAATTATACATTACAGCATCTCCATTTCATAGGATGTCAAATTACTTGGCAAACAGAACTATTCTGAAGCTAGCAGAGAATGAAAGCAGCGTTCACGTTATAGACTTTGGCATTTGCTATGGTTTCCAATGGCCTTGCCTTATCCAACGCCTATCGGAAAGACCAGGCGGCCCACCAAGGCTTCGTATCACAGGAATTGATCTTCCTCAACCAGGATTTCGGCCTGCAGAAAGGCTAGAGGAGACGGGGCGACGCCTAGAGAATTATTGCAAGAGGTTCAATGTGCCATTTGAGTACAATTGCCTAGCACAGAAATGGGAGTCTATTAGACTTGAGGATCTCAAAATTGATAGAAATGAAGTAACAGTAGTTAACTGTTTGTACAGATTGAAGAACCTGTCTGATGAAACTGTGAGTGTGGACTGTCCAAGAGATGCTGTGTTAAGGTTGATCAGGAAGATTAATCCAAACGTCTTCATACATGGGGTTGTTAATGGGAATTACAATGCACCATTTTTCCTGACAAGGTTTAAGGAGGCACTCTTTCACTTCTCAGCATTATTCGATATGTTTGAGGCTAATGTGTCGCGCGATGATCCACACAGGCTGATGTTTGAGAAAGGATTGTTTGGAAGGGATGCCATCAATGTTATAGCGTGTGAAGGCACAGAAAGGGTTGAAAGGCCAGAGACTTATAAGCAGTGGCAGGTTAGGAACCGTAGAGCAGGTTTCAAGCAAATTCCATTGGCTCCAGAACTATTGAATAGAATCAAAGCGATGGTGAAGAACGAACATCATAAGGATTTCGTAGTGGATGAAGATGGCAAATGGGTTTTGCAGGGATGGAAAGGGCGTATTCTGCATGCTCTTTCTTCTTGGATATATGCATTGAATCAAAATAAGAAGAAGCAAACACTAGACAACTAA 2064 0.4196 MDPLVENFMNGLFENSPISVLTNQNSGNGFKVEDSSSPSNHSESPTGYAPSTVSTSPNGESADSTRHSNPILRYISDILMDEEDDLERKPCMLQDCLKLQAAEKLFYAALGGSHPSLPDQIQGCHQHDSPDPDDNSGRTTSCDSNNSSHSTDNSSSYESVWVNGSGDFESSFMHSSLLDDMAIGPFREAQALETWNNIIQSQIKPHTIAAITGSREKRIHHMDDITHEEKERGVKVSAKYVDDSEPPEMFDEVLLCQDGKSPAIFCTNGEPSKQNAADSRASNRKATRKKKGGNKGTSTATTIDLWTLLTQCAQAVTNYDQRNANAILNQIRLHSSAFGDGLQRLAHYFAIGLEARLAAGTPNYMQLHLASAADMLKAYKLYITASPFHRMSNYLANRTILKLAENESSVHVIDFGICYGFQWPCLIQRLSERPGGPPRLRITGIDLPQPGFRPAERLEETGRRLENYCKRFNVPFEYNCLAQKWESIRLEDLKIDRNEVTVVNCLYRLKNLSDETVSVDCPRDAVLRLIRKINPNVFIHGVVNGNYNAPFFLTRFKEALFHFSALFDMFEANVSRDDPHRLMFEKGLFGRDAINVIACEGTERVERPETYKQWQVRNRRAGFKQIPLAPELLNRIKAMVKNEHHKDFVVDEDGKWVLQGWKGRILHALSSWIYALNQNKKKQTLDN 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0218 687 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 674 IPR005202 -
Lal2g0218 687 MobiDBLite consensus disorder prediction 267 298 - -
Lal2g0218 687 MobiDBLite consensus disorder prediction 135 158 - -
Lal2g0218 687 MobiDBLite consensus disorder prediction 24 68 - -
Lal2g0218 687 Pfam GRAS domain family 307 672 IPR005202 -
Lal2g0218 687 ProSiteProfiles GRAS family profile. 296 673 IPR005202 -
Lal2g0218 687 MobiDBLite consensus disorder prediction 267 281 - -
Lal2g0218 687 MobiDBLite consensus disorder prediction 118 158 - -
Lal2g0218 687 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 25 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0218 Lal-Chr2 1269321 1275161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0218 47 673 GRAS Transcription Factor Family AT2G29060 46.022 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal2g0218 GRAS 6.1e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0218 - - lja:Lj3g3v3213190.1 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0218 2 1269321 1275161 Lal2g0218 2 1269321 1275161 ECH
Lal1g0316 1 1924578 1926620 Lal2g0218 2 1269321 1275161 LSH