Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0202 ATGGGAGCTCGTTGCTCTAAATTCTCTCTTTGCTGTTGGTCTTCCAATGTCAAATCTAACCTTCATGACTTATCTGATAATGATGATGGGACCAAGAATGAAAAGGATCCTTTTTCTGGGTTCACTGAGTACACCTTGGATCAACTCAAAGTTGCTACTTCAGGATTTTCACCAGACAACATTGTTTCTGAACATGGCGAGAAAGCTCCAAATGTTGTCTACAAGGGAATACTTGAAGATAATAAGTTGATTGCTGTTAAGCGCTTCAACAAATCGGCTTGGCCTGATTCTCGACAATTTATAGAGGAAGCAAAAGCGGTGGGGCTATTGAGGAACGAAAGATTAGCTAACTTGGTTGGGTTTTGCTGTGAAGGAGAAGACAAATTGCTTGTTGCAGAGTTCATGCCCAATGAAACTCTTTCCAAACATCTTTTTCACTGGGAGAGCCAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCTTTGTATTTAGCACAAGCACTGGAATACTGCAGTAGTAAAGGAAGGGCATTGTACCATGATCTTCATGCTTATAGAATTTTGTTTGATCAGGATGGCAATCCTAGACTCTCCTGCTTTGGACTAATGAAAAGCAGTAGAGATGGCAGAAGCTATAGCACAAACTTAGCTTTCACTCCTCCAGAGTACTTGAGGACAGGAAGAATCACCCCTGAAAGTGTAGTTTACAGTTTTGGCACCCTTTTGCTAGATCTTATGAGTGGGAAGCATATCCCACCAAGTCATGCACTTGAAATTATACGAGCCAAAAATTTCCAGTTGCTGATGGACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCGCGTTGTTTACAATATGAACCTCGTGAGAGACCAAATGCCAAATCGCTTGTGACTGCTCTAACTCCTCTTCAGAAAGAAACTTCAGTACGCTCTTCTTTTTCCCTCCCTGCTTTTTTGTTTCAAGCATCATCATATGTTTTGATGGGCATAACAGAAGGGGGTGTATCACCAAAAGAAACAGTTTCGTTGACACCTTTTGGTGAAGCTTGTTCAAGAAGAGATCTGACCGCAATACATGAAATGTTGGATAAGGTGGGCTACAAGGATGATGAAGATGTTGCAAATGAGCTTTCCTTTCAAATGTGGACAAATCAAATACAAGATACACTAAATTTTAAGAAGCATGGAGATTCTGCTTTTCATGCTATGGACTTCTCTACAGCCATTGACTGCTACACACAATTCATTGATAGTGGGACAATGGTATCACCAACTGTTTATGTGAGGCGAAGCTTATGTTATATGATGAGTGGCATGCCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAGTCTGTAGTTCCCACCTGGCCCACTGCATTCTATCTTCAAGCAGCTGCCCTCTTCAGCCTTGGCATGGACAATGATGCGCAAGAAAGTCTTAAAGATGGCACAATGCTGGAGACCAGAAAACTTAGAAATTGA 1515 0.4185 MGARCSKFSLCCWSSNVKSNLHDLSDNDDGTKNEKDPFSGFTEYTLDQLKVATSGFSPDNIVSEHGEKAPNVVYKGILEDNKLIAVKRFNKSAWPDSRQFIEEAKAVGLLRNERLANLVGFCCEGEDKLLVAEFMPNETLSKHLFHWESQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLHAYRILFDQDGNPRLSCFGLMKSSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLMSGKHIPPSHALEIIRAKNFQLLMDSGLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVRSSFSLPAFLFQASSYVLMGITEGGVSPKETVSLTPFGEACSRRDLTAIHEMLDKVGYKDDEDVANELSFQMWTNQIQDTLNFKKHGDSAFHAMDFSTAIDCYTQFIDSGTMVSPTVYVRRSLCYMMSGMPQEALGDAMQAQSVVPTWPTAFYLQAAALFSLGMDNDAQESLKDGTMLETRKLRN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0202 504 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Lal2g0202 504 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0202 504 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 504 - -
Lal2g0202 504 Gene3D Tetratricopeptide repeat domain 397 504 IPR011990 GO:0005515
Lal2g0202 504 SUPERFAMILY TPR-like 401 499 IPR011990 GO:0005515
Lal2g0202 504 SUPERFAMILY Protein kinase-like (PK-like) 35 315 IPR011009 -
Lal2g0202 504 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 504 IPR045845 GO:0004672|GO:0009742
Lal2g0202 504 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Lal2g0202 504 Gene3D Transferase(Phosphotransferase) domain 1 136 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0202 Lal-Chr2 1200513 1204917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0202 8 325 Receptor kinase-like Gene Family AT3G58690 31.180 2.88e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lal2g0202 PK_Tyr_Ser-Thr 4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0202 - - gmx:732542 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0202 2 1200513 1204917 Lal2g0202 2 1200513 1204917 ECH
Lal1g0304 1 1841458 1845470 Lal2g0202 2 1200513 1204917 LSH