Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0198 ATGGATAACATGGTCACTTTAGAGAAAGATCTAAATAACATGAGGGGTTATTATGAGACTGAAATTACAAAGAAATGTTCTTGGAGAGAGTCACAGCTCAAAGGTTTGCGTTGTTTCCTCATTGAAAAAGAGGAACAAATCTTAAAGGCTCTCATGCAAGATTTAGGGAAACATCAAGTTGAAGCTTTCAGAGACGAGGTAGGGACAGTGATGAAGTCCTTAAATTTCGCATTGACGCATTTAAAATATTGGATGTCAGCGAAAAAGGCAAAATTGCCACAATTAGCATTGCTTACGAGTGCTGAAATTGTTCCCGAACCTTTGGGCCTTGTCCTCATCATTTCATCTTGGAATTTCCCATTTGGTTTATCATTGGAGCCACTTATAGGAGCAATAGCTGCAGGAAACACAGTAGTGTTAAAACCTTCAGAGTTATCTCCAGCATGCTCTTCTCTGCTTGCATATGGTATCTCCACTTATTTGGACAAAGAAGCCATTAAGGTTGTCCAAGCTGGAGCACTTGAGTCTGAGAAATTACTTCACCAAAAATGGGACAAAATTTTCTTTACAGGAAGTGCACGTGTGGGGAGGATAGTGATGAGTGCAGCTGTTAAGCATTTAACACCTGTTACTCTGGAGTTGGGTGGAAAATGTCCTGCTGTGGTTGATTCTCTTTCATCTTCATTTGACATAGCTGTGGGTTCAACAATTAATTATTTTGTTTTTGTTTACTTAACAAAGTTACTCTTTTTGGTAATTAATCAAAAGGTAACTGTGAAGAGGATTATGGTGGGGAAATTTGGGGCCTGTGCTGGTCAAGCATGCATAGCAATTGACTATGTCATTGTGGAAAATGGATATTCTTCAACACTGGTGGAATTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAAAACCCAAAAAATTCCAACACTATTTCGAGGATTGTTAATAAACAACATTTCCTTAGATTGAAGAATCTTCTTACTGATCCAGAGGTCAAAAAGTCTGTGGTTTATGGTGGCTCAATGGACGAAGAAAATTTATTTATTGAGCCAACGATCTTGGTGGATCCTCCACTTGAGGCAGCAATCATGACAGACGAAATATTTGGCCCACTGCTTCCAATTATTACTGTGGAGAAGATAGAAGATAGTATTAAATTGATAAGGTCTAGGCCTAAGCCTCTTGCCCTTTATGTTTTCACCAAAAACCAAACACTGCAGAAAAGAATGATATCTGAAACATCCTCAGGCAGTGTGACTTTCAATGATGCAATTCTACAATATGCAGCAGATTCTCTCCCATTTGGAGGGGTAGGTGAAAGTGGGTTTGGCAAGTACCACGGAAAGTTCTCCTTTGACACATTCAGCCACGAAAAGGGAATAGTGAGAAGAAGTTTCCTCACTGATTTTTGGTATAGATATCCTCCTTGGACACTTAATAAGTTTCAACTACTTGAGGTTTCTTACAACTATGATTATCTGGGACTCTTACTTGTTCTGCTTGGCTTAAAGAGATCACCAAAACGCAGATCATATTTGGTTTGA 1551 0.3894 MDNMVTLEKDLNNMRGYYETEITKKCSWRESQLKGLRCFLIEKEEQILKALMQDLGKHQVEAFRDEVGTVMKSLNFALTHLKYWMSAKKAKLPQLALLTSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNTVVLKPSELSPACSSLLAYGISTYLDKEAIKVVQAGALESEKLLHQKWDKIFFTGSARVGRIVMSAAVKHLTPVTLELGGKCPAVVDSLSSSFDIAVGSTINYFVFVYLTKLLFLVINQKVTVKRIMVGKFGACAGQACIAIDYVIVENGYSSTLVELMKVWIKKMFGENPKNSNTISRIVNKQHFLRLKNLLTDPEVKKSVVYGGSMDEENLFIEPTILVDPPLEAAIMTDEIFGPLLPIITVEKIEDSIKLIRSRPKPLALYVFTKNQTLQKRMISETSSGSVTFNDAILQYAADSLPFGGVGESGFGKYHGKFSFDTFSHEKGIVRRSFLTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGLKRSPKRRSYLV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0198 516 SUPERFAMILY ALDH-like 23 480 IPR016161 GO:0016491
Lal2g0198 516 Coils Coil 41 61 - -
Lal2g0198 516 Pfam Aldehyde dehydrogenase family 258 461 IPR015590 GO:0016491
Lal2g0198 516 Pfam Aldehyde dehydrogenase family 29 224 IPR015590 GO:0016491
Lal2g0198 516 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 214 IPR016162 GO:0016491
Lal2g0198 516 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 444 457 IPR016162 GO:0016491
Lal2g0198 516 PANTHER ALDEHYDE DEHYDROGENASE 6 232 - -
Lal2g0198 516 PANTHER ALDEHYDE DEHYDROGENASE 253 512 - -
Lal2g0198 516 PIRSF ALDH 1 238 IPR012394 GO:0006081
Lal2g0198 516 PIRSF ALDH 243 499 IPR012394 GO:0006081
Lal2g0198 516 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 256 443 IPR016163 GO:0016620
Lal2g0198 516 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 233 IPR016163 GO:0016620
Lal2g0198 516 PANTHER ALDEHYDE DEHYDROGENASE 253 512 IPR012394 GO:0006081
Lal2g0198 516 PANTHER ALDEHYDE DEHYDROGENASE 6 232 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0198 Lal-Chr2 1177902 1181050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0198 6 507 Aldehyde Dehydrogenase Gene Family AT4G36250 51.394 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0198 K00128 - gmx:100817701 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0198 2 1177902 1181050 Lal2g0198 2 1177902 1181050 ECH
Lal8g0338 8 2281863 2284917 Lal2g0198 2 1177902 1181050 PCT
Lal2g0198 2 1177902 1181050 Lal8g0338 8 2281863 2284917 PCT