Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0197 ATGAGTTGGAGCCCACATATGGAGGTCCATTACAATAGCATCAGCTATCCCTATAATACTGCAGGGAGCTTTATTGAATATTTTGAGGGTCTCACCTATGAACATGTCAACTTCATTTTTTCTGGTGCATCACATGCACAGGAGAGCTCCTACCCTTCAACTTCAAGCTTTCACAAGTTTGGACTATCTGACCTCGACGGTAATTCATACTATCGCTACGGTCATGGTTATGATGTAAATCGTCATGAATCACCGATGGATGAGTATAGGAGGCCATCAGAAAACTCATTGACAACCAATGAACAGATGGCAGCAGCAAATACACAATGGGGAGAAAATGTCAACACTGACACACAAGACAGTTCTATTGAACGTCCACGAGGACATCGTAGTAATTCCAATGATTATCAGGTCATTTGGCAAGACAATATTGATCCCGACGACATGACCTATGAGGAACTACTTGAATTAGGTGAGGCTGTCGGAACTCAGAGCCGTGGTCTCACCCAAGAACAGATTTCCTTGCTTCCAGTTTCGAAGTACAAGTGTGGTTTCTTCTTGAGGAAGAAGTCACGCGATGAGAGATGTGTTATTTGCCAGATGGAATATAAGCGAGGGGACAAGCGGATCTCTTTACCATGCATGTCCAGTCTGTTACACAGAGGTGTTTGCCGACAAGTCAAAACACACATAATCACATGA 702 0.4345 MSWSPHMEVHYNSISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESSYPSTSSFHKFGLSDLDGNSYYRYGHGYDVNRHESPMDEYRRPSENSLTTNEQMAAANTQWGENVNTDTQDSSIERPRGHRSNSNDYQVIWQDNIDPDDMTYEELLELGEAVGTQSRGLTQEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRISLPCMSSLLHRGVCRQVKTHIIT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0197 233 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 215 - -
Lal2g0197 233 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 215 IPR033276 GO:0004842|GO:0016567|GO:0046621
Lal2g0197 233 MobiDBLite consensus disorder prediction 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0197 Lal-Chr2 1172320 1177759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0197 5 214 C3H Transcription Factor Family AT3G63530 39.815 4.18e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0197 K19045 - gmx:100793907 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0197 2 1172320 1177759 Lal2g0197 2 1172320 1177759 ECH
Lal2g0197 2 1172320 1177759 Lal9g0200 9 1256627 1261193 ECH
Lal2g0197 2 1172320 1177759 Lal9g0200 9 1256627 1261193 LSH