Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0195 ATGGCAAATGAAAATGGAGAAAGTGTGAATTTGGTAGAGCAACACGGCACCGCTAGATCCCAAAGTGACCAAAAGGTCGAGGTTCTATTACTGGGAGATACACTTGTTGGAAGGAGCAACCATGCACGTCGAAAGGGATCTGTTCCTTACCCAAAAAGCATGGACCATGACAAGACTGGATGCCAAGCTCCCCCTGAAGGTCCTATACTATGCACCAACAACTGCGGCTTTTTTGGAAGTGCGGCTACCATGAACATGTGTTCCAAGTGCCACAAAGATATGATGCAAAAAGAGGAGCAGGCCAAGCTTGCAGCATCGTCCTTCGGGAATATTATGAATGGATCATCAAGCAACACTGCAACTGAACCTGTTGCTGTCAAAGTTGATATCTCAGTCAATGCAGTAGAGCCTAAAACCATCTCTGTGCAACCTTTATTTTCTTCACATTCAGATGAGAGTGGTGAGGCAAAGCCGAAAGATGGTCCAAAGCGTTGCCTTAGCTGTAATAAGCGGGTTGGTTTGACTGGGTTTAATTGTCGATGCGGTAACCTTTTCTGTGCTGTACATCGCTACTCAGACAAGCATGATTGTCCATTTGATTACCGTAGTGCTGGACGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGTCTGAGAAGCTTGATAAGATCTAA 675 0.4548 MANENGESVNLVEQHGTARSQSDQKVEVLLLGDTLVGRSNHARRKGSVPYPKSMDHDKTGCQAPPEGPILCTNNCGFFGSAATMNMCSKCHKDMMQKEEQAKLAASSFGNIMNGSSSNTATEPVAVKVDISVNAVEPKTISVQPLFSSHSDESGEAKPKDGPKRCLSCNKRVGLTGFNCRCGNLFCAVHRYSDKHDCPFDYRSAGRDAIAKANPVVKSEKLDKI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0195 224 ProSiteProfiles Zinc finger A20-type profile. 65 99 IPR002653 GO:0003677|GO:0008270
Lal2g0195 224 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 70 107 - -
Lal2g0195 224 PANTHER AN1-TYPE ZINC FINGER PROTEIN 54 224 - -
Lal2g0195 224 SMART AN1_Zf_4 165 202 IPR000058 GO:0008270
Lal2g0195 224 Gene3D - 54 121 - -
Lal2g0195 224 MobiDBLite consensus disorder prediction 40 59 - -
Lal2g0195 224 Pfam A20-like zinc finger 69 92 IPR002653 GO:0003677|GO:0008270
Lal2g0195 224 SUPERFAMILY AN1-like Zinc finger 148 219 IPR035896 -
Lal2g0195 224 Pfam AN1-like Zinc finger 167 201 IPR000058 GO:0008270
Lal2g0195 224 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 54 224 - -
Lal2g0195 224 MobiDBLite consensus disorder prediction 1 22 - -
Lal2g0195 224 ProSiteProfiles Zinc finger AN1-type profile. 159 205 IPR000058 GO:0008270
Lal2g0195 224 Gene3D - 143 220 IPR035896 -
Lal2g0195 224 SMART A20_3 68 92 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0195 Lal-Chr2 1161307 1163427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0195 61 224 C2H2 Transcription Factor Family AT3G52800 43.030 1.41e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0195 - - gmx:100500070 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0195 2 1161307 1163427 Lal2g0195 2 1161307 1163427 ECH
Lal2g0195 2 1161307 1163427 Lal9g0198 9 1248082 1250154 ECH
Lal20g0241 20 1708095 1711427 Lal2g0195 2 1161307 1163427 ECH
Lal1g1703 1 19482788 19483306 Lal2g0195 2 1161307 1163427 ECH
Lal2g0195 2 1161307 1163427 Lal9g0198 9 1248082 1250154 LSH