Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0182 ATGGGAAGTTGCATTTCATCACCAGGAAAAACATTCCCACGTAAAAGGTATAAGGAGCCTATCACCAAACCTTGTACACCAAGAAACAACCAACATGATCATTTTAATTATGACCCACCAACACCAACCACCGTGCCCCGCTCCTCAATGCGGCCACCGATCAACGTTGTAGCTAGTCCTTCGCCGGGGAATATATTTGACAAGTATCAATTAGGGAAGGAGCTAGGGAGAGGGGAGTTTGGTGTAACACATAGGTGCGTGGAATTGAAGAGTGGTGAGGCATTTGCATGTAAGAAGATAGCCAAGACTAAGTTGAGGACCGAGATTGATATTGCTGATGTGAGAAGGGAGGTGCAGATCATGAGGCATTTGCCTAAACACCCCAATATTGTGTCCTTTAGAGAGGCTTATGAGGATAGAGATGCTGTTTATCTTGTTATGGACCTTTGTGAAGGTGGTGAACTTTTTGATAGGATTGTTGCTAAGGGACATTATACCGAACGTGCTGCTGCTAATGTTACAAAGACAATACTTCAAGTGTGTAAGGTGTGTCATGAGAACGGGGTAATACACAGGGACTTAAAACCTGAAAATTTCTTATTTGCAGATGGAAGTGAGACTAGTCCCTTAAAGGCAATTGATTTTGGACTTTCTACCTTCTATGAAGCTGGGGAAAGATTCAGTGAAATTGTTGGAAGTCCCTATTACATGGCTCCAGAGGTCTTAAGGCGTAACTATGGACCTGAAATTGATGTGTGGAGCACAGGCGTTATTCTTTATATTTTACTTTGTGGAGTTCCACCCTTTTGGGCAGAAACTGAGGAAGGAATTGCACAGACCATTATCCGAGGTAATCTTGATTTCACAAGAGATCCTTGGCCTAAAGTTTCAGAAGAAGCAAAAGACATAATTAAGCGTATGCTCGATTCAAATCCATACACCCGTATAACACTGCAAGAAGTTCTTGAACATTCTTGGATACAAAATAAGGACCATGCCCGAAATGTTTCTCTTGGAGACCAAGTGAGAATGAGGATCAAGACATTCTCCTTGATGAACAGATTCAAAAAGAAGGTTCTTAGAGTGGTGGCTGATAACCTTCCAGATGAGCAAGTTCAATATATAAGGAAAATGTTTGATATGATGGATAAGGACAAAAATGGGCACTTAACATTTGAAGAGCTCAAAGATGGTCTTGCAATGCTAGGACACACTCTTCCTGATCCTGATATTCAGATGTTAATGGAAGCTGCAGATATTGATGGAAACGGCACGCTGAATTGTGAAGAGTTTATGACAATGAGTGTTCATCTGAGAAAGATAGAAAGTGATGAGCATCTGAGTGAAGCATTCAATTACTTTGACAAGAATCAGAGCGGGTATGTTGAGTTTGAAGAGTTGAAAGATGTGTTATCAGATGATGGTTTGGGACTTAATGACGACAAGGTGATCAGAGACATTCTAAATGATGTCGACTTGGATAAGGATGGAAGAATAAGCTTTGAGGAGTTTAAGGCAATGATGAAGACAGGAGGAGATTGGAAAATGGCTTCTCGGCAGTATTCAAGAGCAATGCTAAATGCATTAAGCATCAAGATGTTTAAAGACAAATCTATAAGTGTAGCTAACTAG 1632 0.4081 MGSCISSPGKTFPRKRYKEPITKPCTPRNNQHDHFNYDPPTPTTVPRSSMRPPINVVASPSPGNIFDKYQLGKELGRGEFGVTHRCVELKSGEAFACKKIAKTKLRTEIDIADVRREVQIMRHLPKHPNIVSFREAYEDRDAVYLVMDLCEGGELFDRIVAKGHYTERAAANVTKTILQVCKVCHENGVIHRDLKPENFLFADGSETSPLKAIDFGLSTFYEAGERFSEIVGSPYYMAPEVLRRNYGPEIDVWSTGVILYILLCGVPPFWAETEEGIAQTIIRGNLDFTRDPWPKVSEEAKDIIKRMLDSNPYTRITLQEVLEHSWIQNKDHARNVSLGDQVRMRIKTFSLMNRFKKKVLRVVADNLPDEQVQYIRKMFDMMDKDKNGHLTFEELKDGLAMLGHTLPDPDIQMLMEAADIDGNGTLNCEEFMTMSVHLRKIESDEHLSEAFNYFDKNQSGYVEFEELKDVLSDDGLGLNDDKVIRDILNDVDLDKDGRISFEEFKAMMKTGGDWKMASRQYSRAMLNALSIKMFKDKSISVAN 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0182 543 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Lal2g0182 543 MobiDBLite consensus disorder prediction 1 37 - -
Lal2g0182 543 Gene3D Transferase(Phosphotransferase) domain 1 155 335 - -
Lal2g0182 543 ProSitePatterns EF-hand calcium-binding domain. 492 504 IPR018247 -
Lal2g0182 543 SUPERFAMILY EF-hand 366 508 IPR011992 -
Lal2g0182 543 ProSiteProfiles EF-hand calcium-binding domain profile. 479 514 IPR002048 GO:0005509
Lal2g0182 543 Pfam EF-hand domain pair 445 509 IPR002048 GO:0005509
Lal2g0182 543 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Lal2g0182 543 Pfam EF-hand domain pair 387 437 IPR002048 GO:0005509
Lal2g0182 543 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Lal2g0182 543 Gene3D - 336 511 - -
Lal2g0182 543 SMART serkin_6 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0182 543 ProSiteProfiles Protein kinase domain profile. 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0182 543 SUPERFAMILY Protein kinase-like (PK-like) 46 343 IPR011009 -
Lal2g0182 543 CDD STKc_CAMK 68 326 - -
Lal2g0182 543 Gene3D Phosphorylase Kinase; domain 1 71 154 - -
Lal2g0182 543 CDD EFh 374 434 IPR002048 GO:0005509
Lal2g0182 543 Pfam Protein kinase domain 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0182 543 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Lal2g0182 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Lal2g0182 543 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Lal2g0182 543 SMART efh_1 374 402 IPR002048 GO:0005509
Lal2g0182 543 SMART efh_1 410 438 IPR002048 GO:0005509
Lal2g0182 543 SMART efh_1 483 511 IPR002048 GO:0005509
Lal2g0182 543 SMART efh_1 446 474 IPR002048 GO:0005509
Lal2g0182 543 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 24 49 524 - -
Lal2g0182 543 PANTHER SERINE/THREONINE-PROTEIN KINASE 49 524 - -
Lal2g0182 543 ProSitePatterns EF-hand calcium-binding domain. 419 431 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0182 Lal-Chr2 1072674 1075713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0182 1 536 EF-hand Containing Proteins AT2G31500 66.728 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal2g0182 Pkinase 3.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0182 K13412 - gmx:100818929 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0288 1 1708852 1712825 Lal2g0182 2 1072674 1075713 LSH
Lal2g0182 2 1072674 1075713 Lal9g0185 9 1150841 1153613 LSH