Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0146 ATGACGGCCTCCGGCGGCGCCGATCTGCCGGAGATGTCAACCAAGACTTCATTTTTTGGCATCAAGCTATTTATCTTCATAGCCATTTTGTTTGCGATCGGGATTGTAATCGTACTCATCTTTATCTTCCTTTGCTTTCGCCGAAACTCCAAGAAACACGGAAGGGTGATAAAGAAGCATAGCTCCGGTACAATCCCTCTGGTTTCGAAGGATATCAACGTAGCCAAACACAAACCAACGGATCTCACTGAAAAAGCACAGTTCGCTGAGATCGAAGACACTGACCCGAAGAAGAATGAAATATTGGAGATGAAGGTTGAAATTGGAACGAGAGGAAAAAAGAGCGAGGGAGAGTGCAGTGACGTGTCATATGGTGGTCGAAGTGAAACGTCGTCGTTGTTGGTGGAGGATCCAAACATAGGGTGGGGACGGTGGTATAGCATGAAGGAAGTGGAGATTGCAACGCGTGGGTTTGCAAAAGAGAATGTGATTGGAGAAGGTGGATATGGAATTGTCTATAGAGGACTTCTACAAGATGGTAATATCGTCGCTGTCAAGAATCTTCTCAATAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGGAAAGTTAGGCATAAGAATTTGGTTCGCTTAGTAGGATATTGTGCAGAAGGTGCTAAAAGGATGCTTGTTTATGAATACGTTGACAATGGAAATTTGGAGCAGTGGCTACATGGTGATGTAGGATCAGTTAGCCCCTTGACATGGGACATTCGAATGAGGATTGCAATCAACACTGCAAAAGGGCTAGCCTATTTGCACGAAGGTCTGGAACCCAAAGTTGTGCACCGAGATATAAAATCCAGTAACATTCTTTTGGACAAAAATTGGAATGCCAAGGTATCAGATTTTGGACTTGCCAAGCTCCTAGGATCTGAGAAAACACATGTGACTACACGTGTAATGGGAACATTTGGATATGTTTCACCTGAGTATGCAAGCACGGGTATGCTTAATGAACGCAGTGATGTATATAGCTTTGGAGTTCTACTTATGGAGATAATTACAGGAAGAAGCCCCATTGATTATTCTAAACCACCTGGAGAGATGAATTTGGTTGATTGGTTTAAGGGAATGGTTGCAAGTCGTCGGGGTGATGAGCTAGTTGATCCTTTAATTGAGGTTCAGCCCTCTCCAAGATCTCTGAAGCGGGCTTTACTGGTTTGTCTGCGCTGTATAGATTTGGATGTTATTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAAGCAGATGATTTTCCTTTTCGTTCTGAGCTTCGGACAATGAGAGAGAAAGATCTGGTGCCTTCTCATGCAGATATTTACAGTAAAGTTCCATATCCATCAAAGCATGCAGAGCCCGTCGAAAAATCAAGATGGCGATAA 1428 0.4349 MTASGGADLPEMSTKTSFFGIKLFIFIAILFAIGIVIVLIFIFLCFRRNSKKHGRVIKKHSSGTIPLVSKDINVAKHKPTDLTEKAQFAEIEDTDPKKNEILEMKVEIGTRGKKSEGECSDVSYGGRSETSSLLVEDPNIGWGRWYSMKEVEIATRGFAKENVIGEGGYGIVYRGLLQDGNIVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGAKRMLVYEYVDNGNLEQWLHGDVGSVSPLTWDIRMRIAINTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRSPIDYSKPPGEMNLVDWFKGMVASRRGDELVDPLIEVQPSPRSLKRALLVCLRCIDLDVIKRPKMGQIVHMLEADDFPFRSELRTMREKDLVPSHADIYSKVPYPSKHAEPVEKSRWR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0146 475 SUPERFAMILY Protein kinase-like (PK-like) 136 430 IPR011009 -
Lal2g0146 475 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Lal2g0146 475 CDD STKc_IRAK 164 430 - -
Lal2g0146 475 PANTHER OS01G0323000 PROTEIN 14 475 - -
Lal2g0146 475 Pfam Protein kinase domain 159 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0146 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Lal2g0146 475 ProSiteProfiles Protein kinase domain profile. 158 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0146 475 PANTHER RECEPTOR-LIKE KINASE 14 475 - -
Lal2g0146 475 Gene3D Transferase(Phosphotransferase) domain 1 234 443 - -
Lal2g0146 475 SMART serkin_6 158 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0146 475 Gene3D Phosphorylase Kinase; domain 1 128 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0146 Lal-Chr2 874165 883396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0146 138 430 Receptor kinase-like Gene Family AT4G02010 47.475 2.83e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lal2g0146 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0146 - - lang:109351508 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0146 2 874165 883396 Lal2g0146 2 874165 883396 ECH
Lal1g0230 1 1365206 1369292 Lal2g0146 2 874165 883396 ECH
Lal1g0230 1 1365206 1369292 Lal2g0146 2 874165 883396 LSH