Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0142 ATGGTTTATTCCTGTCAGAAATACAACCTTTACCTTCTCCCTCCATGCTCTTGTATCCCTCTCAAATCCAAATCAATTTCAACCATTTTCAACTGTCAACAAAACCCAAATGAAAAACAACAACAACAACAACAACAACCCATTCTCCGCAAACACAATTCCAAATCCACATCATTTCTTCTTCACCACCTTTCCAACAAGCATGATTCTTCCCAACAACAACTCATTCCAAAACCCAGTGACCTTCAAGATTCCATGCCCCACAAAGAAAAGGTTCAACTTTTAGAACTTTCCCTTGTTAGAAAGAGAACCCCTCAATTCCCTGGCTCTATATATGCTCAATCCCCTAGTGACCCTGATGTGGGTTCTTCTCTTCCACCTCTTCGAACCCTTTTTCAATCAACAACTTCTCATATTGATGACGATGATGAGATTATCATGCGTGCTATTGAAATTCGAAGGAAAGTAACTGAGGAAGTTTTCAAAGAAGCCATGATGAGGAAGGGCAAGTTTGGAATTACCTACACTACTAATTTGATTAGTAGGTTGCAAGGTTTTATTGATTTTATCATGATTGAAGCTGCTAACATGAAAAAATTGCCTGAATATTCTCACTCCACCTTCAATTTACGCGCCAAAACTGTCATTGAGAACTCCCAAGTTGTGCCACTTATCAGATGGTTGAAGCATAACTCAGTATCCTATCCTCGGATAGCAAAGCTCATTTTAATGTCAAAAGGAAAATTGGAGTCCATAAGGAATCGTAGTGAGTGGTTGAAGTCAATACATGTGAGAGGGGACTATCTCGGGGTTGCACTCGTGAATGCCGGAGAGAATATTCTGCAACGCAGCAATGAGGAACTTGATGAAATTGTTGAGTATTTGGAGTCAAATGGAGTCAGGAAGGATTGGATGGGTTTTGTGATGAGTCGATGTCCTCAACTATTGTCTTATAGCTTAGAAGAAGTGAAGAACCGTGTGCAGTTCTACCTAGATATGGGTTTAAATCAGAAGGATTTCGGCACAATGGTTTTTGATTATCCTAAAGTACTTGGCTACCTTACCATGGAAGAAATGAAGCAAAAGGTTAATTACCTAAAAGAATTTGGGCTTCAAACTGTGGATGTTGGTAGATTGCTAGCATTTAAGCCGGAGTTGATGGCATGTAGCATTGATGAACAATGGAAACCTCTTGTTAAGTATTTGTACTACCATGGAATCACCCGAGATGGTATGAGGAGAATGCTTACCTTAAAACCAATGGTGTTTTGTATTGACTTGGAGATGACTATTGTGCCAAAGGTACGATTTTTTCAAGACATGGGGGTTCGAGATGATGCAATTGGCAGCATGCTTGTAAAGTTTCCCACTCTACTCACTTACAGTCTCTATAAGAAGATTAGGCCAGTGATCATATTCTTGATGACCAAAGGTGGAGTAAGTGAAAGAGATATTGGCAAGGTTGTAGCTATGGGACCTGAGCTTTTAGGATGCAGCATAACAGATAAACTTGAAGTAAATGTAAAATATTTTTTGTCTCTTGGCATTCGTCTTCGGCAATTGGGTGAGATGATTGCTAATTTCCCAATGCTGCTCAGATATAATATCGATGTCCTTCGTCCCAAGTACAGTTTTTTGAGGAGAACCATGGTCCGGCCTTTGGAAGATATCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGATGGTCGAATTATCCCTAGACACAAGGTTCTGGTGGAGAATCAGATTAATATTAAGCTTAGGTACATGTTGGCTTGTAGTGATGAAGAATTCAACAAATTGGTGAAGGATTTAATTAGAAAGCGCCAAAGGTTTCAATCAGCTGGGATGACAGAGGATACTACTCATCCCCAACATGTCATCACTAAACACCAGATTCAATGA 1908 0.3968 MVYSCQKYNLYLLPPCSCIPLKSKSISTIFNCQQNPNEKQQQQQQQPILRKHNSKSTSFLLHHLSNKHDSSQQQLIPKPSDLQDSMPHKEKVQLLELSLVRKRTPQFPGSIYAQSPSDPDVGSSLPPLRTLFQSTTSHIDDDDEIIMRAIEIRRKVTEEVFKEAMMRKGKFGITYTTNLISRLQGFIDFIMIEAANMKKLPEYSHSTFNLRAKTVIENSQVVPLIRWLKHNSVSYPRIAKLILMSKGKLESIRNRSEWLKSIHVRGDYLGVALVNAGENILQRSNEELDEIVEYLESNGVRKDWMGFVMSRCPQLLSYSLEEVKNRVQFYLDMGLNQKDFGTMVFDYPKVLGYLTMEEMKQKVNYLKEFGLQTVDVGRLLAFKPELMACSIDEQWKPLVKYLYYHGITRDGMRRMLTLKPMVFCIDLEMTIVPKVRFFQDMGVRDDAIGSMLVKFPTLLTYSLYKKIRPVIIFLMTKGGVSERDIGKVVAMGPELLGCSITDKLEVNVKYFLSLGIRLRQLGEMIANFPMLLRYNIDVLRPKYSFLRRTMVRPLEDIIEFPRFFSYSLDGRIIPRHKVLVENQINIKLRYMLACSDEEFNKLVKDLIRKRQRFQSAGMTEDTTHPQHVITKHQIQ 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0142 635 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 63 623 - -
Lal2g0142 635 Pfam mTERF 333 599 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 Pfam mTERF 244 428 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 SMART mt_12 271 301 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 SMART mt_12 306 336 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 SMART mt_12 377 408 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 SMART mt_12 522 552 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 SMART mt_12 554 585 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 SMART mt_12 486 517 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 SMART mt_12 449 480 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 SMART mt_12 341 372 IPR003690 GO:0003690|GO:0006355
Lal2g0142 635 MobiDBLite consensus disorder prediction 616 635 - -
Lal2g0142 635 Gene3D Transcription termination factor 3, mitochondrial 368 607 IPR038538 -
Lal2g0142 635 PANTHER CGI-12 PROTEIN-RELATED 63 623 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0142 Lal-Chr2 858790 862420 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal2g0142 mTERF 7e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0142 K15032 - qsu:112038612 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0142 2 858790 862420 Lal2g0142 2 858790 862420 ECH