Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0131 ATGTCGATGTCCGGCCAATTTGATCGTTTCGCCATACCTTGCTTTGATGGTTTATCCGGTAGTGATGAGAAAAGGGAAAGAAGATTTGATTTTGAGAACGATGAGGATGAAAGGAGGAATAAAATTGGATCTCTAAAAAAGAAAGCCTTCAATGCATCTTCCAAATTCAAGCATTCTCTAAAGAAGAACTCCAGGAAGAAAAGTGATGGCCGCGTTAGGTCCATTTCCATCGAGGATGTTCGGGATGTCGAGGAGCTGCAGGCTGTTGATGCATTTCGCCAGTCATTGATTTTGGATGAATTGCTTCCAGAAAAACACGATGATTACCATATGATGTTAAGATTTCTGAAAGCAAGGAAGTTTGACATTGAAAAAGCAAAGCATATGTGGGCTGATATGCTACAATGGAGGAAAGAGTTTGGTGCCGACACTATTATGGAGGATTTTGAGTTCAAAGAAATAGATGAAGTTTTAAAGCATTATCCGCACGGTTATCATGGCGTTGATAAGGAGGGTAGACCTGTTTACATTGAAAGACTTGGAAAAGTTGATCCAAACAAACTGATGCAAGCTACCACTTTGGATAGATATGTAAAGTACCATGTACAGGAGTTTGAGAAAACTTTTGCGATAAAGTTTCCTGCTTGTACAATTGCTGCCAAAAAGCACATAGATTCAAGCACCACAATCTTAGATGTTCAAGGCGTGGGCCTTAAGAACTTTTCAAAGTCTGCCCGGGAACTGCTTACGCGAATTCAGAAGATTGATGGTGACAATTACCCTGAGACGCTGTCCCAAATGTTTCTCATAAATGGTGGCCCCGGATTTAGGTTGCTTTGGAACACTGTCAAGTCTTTTCTTGACCCAAAAACAGCTTCAAAGATTCATTTTCTCGGAACCAAGTACCAAAGCAAATTGCTTGAAATAATTGATGCGAGTGAGTTGCCAGAATTTCTGGGAGGCACCTGCACTTGTGCGGATCAGGGAGGTTGTCTAAGATCTGATAAAGGGCCATGGAAAAACCCTGAAATATTGAAGATGATTATGAGTGACGAAGCACGGTGCCCAAGGCAGGTAGTAAAACTTCTAAACAGTGATGGAAAGGTTATTGCATATGCCAAACCAGGACACCTGATGGGAAAAGGCAGTGATACATCGACAGCTGAATCAGGGTCCGAAGCTGAAGATATAGCTTCTCCAAAAGCAGCACATAATTACTCGAACCATAAGTTGACCCCAGTTCACGAGGAAGCTAAGGTATTTGGATTGTCAAGCTATGCTGCTAGCGGTAACCTATCTGGGTATGATGAATATGTTCCAATGGTGGACAAAGCTGTTGATGCTGTTTGGAAGAAGCAAGCTTCACTCAAGTGCTCTCATGCTTCAAAAGTAGCACCTCCCCCTCTTGACACTCCAAAATCTCTAGAAGGGATTCGAGCTCGGATTTGGATCGCCATGACTGTCTTCTTTTTGACTCTATTTACTCTCTTCGGCTCATTCACTAGCCGTGTGACCAAGAAGCTTCCTGCGGTATCATCTAATGATTGTCAGGGCACTTCAGAGCCAACTTCTGATGCAACAAACAAGGATGACGTGCATCCTGCTTCACCTACTCCAGCTCATACTGTGGAAAATCCCCATTCCTCCATGATGAAAAGGTTATGCGAGCTTGAAGAGAAGGTTGACACACTCAAATCTAAGCCATCTGAAATGCCTTGTGAGAAAGCAGAACTGCTAAATGCTGCCGTCTGCCGGGTGGATGGTTTGGAAGCAGAGTTAATTGCAACTAAAAAGGCTCTCTATGAGGCATTAATACGGCAAGAAGAGCTGCTTGCTTATATTGATCGCCGAGAAGAAGCTAGATTACGAACTCTGGAGGAGAGTGGTTTGCAAATCACAGTGTTTGTGAGGAGTGTTGACCTTGCATCTGATGCAATTTTGGTGATCGTAGGTTTCTTGGGGATACGTGTTATGTTATCTTTTCACCCATCCACCTTCAGGAGTGATGATGAAGAAGAGAATTACTCAGATATGGAATCAATTAGCAGTGTTGCTAGACATGACACTGCACGTTTACAATTGTTGTGTGATGGTCCCTTTGAGTTAATCCTTATTATACTTGTACTCAATTGTTTAATAAAACTTGAACCCAATGGGCCTACGCTCTCCCATAAAAACGGGTCTAGGGTTTCTTGTCCTCTATATGCTGCTGTCACATTCTTGCGCTTGCGCCTCCTCTTGAAACCCGTTCCTTCTCTCAGAAATCATCTCATGGCTCCAAAGAAGGAAAAGGCTCCCCCACCTTCCTCCAAACCCGCCAAATCTGGTGGTGGCAAGCAGAAAAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACATGGTTCTGTTCGATCAGGCTTCATATGACAAGCTCCTCACTGAAGCACCTAAGTTCAAGCTCATCACTCCTTCCATTCTTTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCTATAAGGGACTTGATGGCAAGAGGATCAATCAGGTTGGTGTCTGCCCACTCAAGTCAGCAGATTTACACCAGAGCTACAAACACTTAG 2598 0.433 MSMSGQFDRFAIPCFDGLSGSDEKRERRFDFENDEDERRNKIGSLKKKAFNASSKFKHSLKKNSRKKSDGRVRSISIEDVRDVEELQAVDAFRQSLILDELLPEKHDDYHMMLRFLKARKFDIEKAKHMWADMLQWRKEFGADTIMEDFEFKEIDEVLKHYPHGYHGVDKEGRPVYIERLGKVDPNKLMQATTLDRYVKYHVQEFEKTFAIKFPACTIAAKKHIDSSTTILDVQGVGLKNFSKSARELLTRIQKIDGDNYPETLSQMFLINGGPGFRLLWNTVKSFLDPKTASKIHFLGTKYQSKLLEIIDASELPEFLGGTCTCADQGGCLRSDKGPWKNPEILKMIMSDEARCPRQVVKLLNSDGKVIAYAKPGHLMGKGSDTSTAESGSEAEDIASPKAAHNYSNHKLTPVHEEAKVFGLSSYAASGNLSGYDEYVPMVDKAVDAVWKKQASLKCSHASKVAPPPLDTPKSLEGIRARIWIAMTVFFLTLFTLFGSFTSRVTKKLPAVSSNDCQGTSEPTSDATNKDDVHPASPTPAHTVENPHSSMMKRLCELEEKVDTLKSKPSEMPCEKAELLNAAVCRVDGLEAELIATKKALYEALIRQEELLAYIDRREEARLRTLEESGLQITVFVRSVDLASDAILVIVGFLGIRVMLSFHPSTFRSDDEEENYSDMESISSVARHDTARLQLLCDGPFELILIILVLNCLIKLEPNGPTLSHKNGSRVSCPLYAAVTFLRLRLLLKPVPSLRNHLMAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLTEAPKFKLITPSILSDRLRINGSLARKAIRDLMARGSIRLVSAHSSQQIYTRATNT 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0131 865 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8-LIKE 6 623 - -
Lal2g0131 865 SMART sec14_4 153 324 IPR001251 -
Lal2g0131 865 Gene3D - 141 352 IPR036865 -
Lal2g0131 865 SMART CRAL_TRIO_N_2 108 133 IPR011074 -
Lal2g0131 865 Gene3D - 778 865 - -
Lal2g0131 865 Pfam S25 ribosomal protein 764 862 IPR004977 -
Lal2g0131 865 CDD SEC14 154 322 IPR001251 -
Lal2g0131 865 Pfam CRAL/TRIO domain 159 321 IPR001251 -
Lal2g0131 865 Pfam CRAL/TRIO, N-terminal domain 104 132 IPR011074 -
Lal2g0131 865 MobiDBLite consensus disorder prediction 511 531 - -
Lal2g0131 865 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 153 327 IPR001251 -
Lal2g0131 865 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 6 623 - -
Lal2g0131 865 SUPERFAMILY CRAL/TRIO N-terminal domain 83 149 IPR036273 -
Lal2g0131 865 SUPERFAMILY CRAL/TRIO domain 153 347 IPR036865 -
Lal2g0131 865 MobiDBLite consensus disorder prediction 511 549 - -
Lal2g0131 865 Gene3D - 76 140 - -
Lal2g0131 865 MobiDBLite consensus disorder prediction 757 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0131 Lal-Chr2 801166 810380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0131 758 864 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 90.654 5.78e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0131 - - lang:109351490 1132.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0131 2 801166 810380 Lal2g0131 2 801166 810380 ECH
Lal1g0210 1 1259944 1265390 Lal2g0131 2 801166 810380 LSH