Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0128 ATGATGAGAATGATTTATACCTCGTTCTGTGTTACCCTCATTTGTATAACTGGTTGTTCTGCATTCAGTGACATGTATCCGCTAATGAAGATGAAGGAATCAATGAAGGGAAAGGGAGCGAAAGTTGAGGCACTTGAAGACTGGAAGTTTTCAAACTCTGTTTCTGCACAATGTTCATTCTCAGGCGTGAAATGTGACCAAAATCTCAGAGTCATTTCACTCAATATATCCTTCATTCCTCTGTTCGGTTCAGTTCCTGCAGAGATAGGACTTTTGGAGAAGCTTGTGAACCTCACCATCGCTCAGAGTAACCTCACTGGTGAGCTCCCTAAGGAGCTTTCCAACCTTACTTCCCTTAAAATTCTCAACATCTCTCACAACGTCTTCTTTGGTCACTTCCCTGGCCAAATCACTCTTGGAATGACTCAGCTAGAAATCCTTGATGCCTATGATAACAACTTCACTGGACCACTCCCTAAGGAAATAGTTAAACTCAACAAACTCAAATTCCTTCACCTTGGTGGTAACTATTTCTCAGGCCAAATACCTGACAGTTACTCACAGTTTCAGAGCTTGGAGTACTTAAGCTTAACATACAACAGTTTAACAGGTGAGATTCCAAAGAGTTTGGGTATATTGAAGACGTTGAAGGAATTGTATTTAGGTTACAGCAATGCTTATGAAGGTGGTATCCCTGAAGAGCTTGGTTTCATTCAATCTCTTCAACTTCTTGATTTAGCTAGCTGCAACTTGAGCGGTAAGATTCCACCAACTTTGGGCAAGTTGAGCAATTTAAACACTCTGTTCTTACAAATGAACAATCTCAGTGGCACCATTCCGCCGGAGCTCTCCTCCATGATCAGCCTCATGTCGTTGGATCTCTCCATCAACGACCTCACTGGAGAGATACCAGAGACTTTCTCTCAGCTCAAAAATCTCACACTTATTAGTTTCTTCCAGAATAAGCTTCGCGGTTCTATTCCAGAATTTGTTGGTGAACTTCCCAACCTTGAAACGTTTCAGATTTGGGAGAACAATTTCTCTTATGTTCTTCCGTCGAACCTTGGCCAGAACGGCAAGTTTAAGTTCTTTGATGTCACCAAGAACCATCTCACTGGTTTGATCCCGAAGGATTTATGCAAAGGAGGAAGGTTACAAACGTTTATCTTCACTGATAACTTCTTCTACGGTCCGATTCCAAAGGAAATTGGTAATTGTAAGTCACTACTCAAGTTTCGAGTTGCAGATAACTTCCTCGACGGGTCAATTCCGGCGGGGATTTTCAACCTACCTTCTGTCAGCGTCATGGAGTTCGATAATAACCGTTTCAACGGTGAACTACCTTCAGAGATTTCCGGCAATTCTGTCTGGATCCTCACCCTTTCCAACAACATGCTCACCGGTACAATTCCTTCCGGGTTGAAAAATCTCAAAAGTTTGCAGACTCTATCACTAGACGCAAATCAATTCGTTGGTGAAATCCCTAGGGAAGTATTTGAATTACCAATGCTGATGAAGATCAACGTAAGCGGCAACAACCTCACCGGACAAATCCCAACGACTTTGACTCGATGTGTTTCACTAACTGCCATTGATCTTAGCCGTAACATGGTGATAGGAGAGGTTCCAAAGGGGATAAAGAAGTTGAAGGACTTAAGCATTTTGAATGTTTCAAGAAATAATATATCAGGTCCAATTCCCGATGAAATTCGATTCATGACGAGTCTCACCACACTCGACCTCTCCAACAATAACTTCATTGGAAGAATCCCAACGGGTGGTCAGTTTCTGGTCTTCAACGATAGGTCCTTTTATGGGAACCCTAACCTCTGTTCCTCTCACCAACCCTCTTGCCCTTCCTTGGTGTACCAAAACGACAACGTGCACAAAACTCAAAGTTCAAACTCCACTAAAATCATAATCATTGTAATTACACTCTCAACCGCGTTGTTACTTGTTTTCGTAACCATATACATGATGAGGAAGAGAAAGATTCATAAATCAATGAAGTGGAAGCTAACAGCGTTTCAGAAACTCGAGTTCAAAGCGGAAGAGGTGGTGGAGTGTTTGAAGGAAGAGAACATAATAGGGAAAGGAGGAGCAGGGATTGTGTACCGCGGGTCCATGGGAAACGGAACTGACGTGGCAATTAAGCGTTTAGTAGGTCAAGGAAGTGGTAGAAACGATTACGGGTTCAAAGCAGAGATTCAAACGCTGGGAAGGATAAGGCATAGAAACATAATGAGGCTTCTAGGGTATGTCTCAAATAAGGACACAAACTTGTTGCTTTATGAGTACATGTCTAATGGGAGTTTAGGGGAGTGGTTGCATGGAGCAAAGGGTGGGCATTTAACATGGGAAATGAGGTATAGGATTGCGGTAGAAGCAGCAAAAGGATTATGCTATTTGCATCATGATTGTTCTCCTCTCATTATTCATAGAGATGTTAAGTCCAATAATATATTATTGGATGGGGAGTTTGAGGCACATGTTGCTGATTTTGGACTAGCAAAGTTCTTACACGACCAGGGAGGTTCACAGTCAATGTCATTTATTGTTGGTTCATACGGTTACATTGCACCAGAGTATGCATACACGCTGAAAGTGGATGAGAAAAGTGACGTGTATAGCTTCGGGGTGGTGCTGTTGGAGTTGATAGTTGGAAGAAAGCCAGTTGGTGAATTTGGAGATGGAGTTGACATCGTTGGATGGATAAAGAAAAGAGAAACAGAAATATGTGAGCCGTCAGATGCAGCATCAGTGTTAGCAGTTGTGGATCCAAGAATGAGTCAATACCCATTGACAAGTGTCATACATATGTTCAATATAGCAATCATGTGTGTCAGGGAAATGGGCCCCGCAAGGCCTACAATGAGGGAAGTTGTCCATATGCTCACTAATCCCCAAATACACAACAAACTCTCTCCAAATAACATGCATGTGTATAATTAA 2952 0.4221 MMRMIYTSFCVTLICITGCSAFSDMYPLMKMKESMKGKGAKVEALEDWKFSNSVSAQCSFSGVKCDQNLRVISLNISFIPLFGSVPAEIGLLEKLVNLTIAQSNLTGELPKELSNLTSLKILNISHNVFFGHFPGQITLGMTQLEILDAYDNNFTGPLPKEIVKLNKLKFLHLGGNYFSGQIPDSYSQFQSLEYLSLTYNSLTGEIPKSLGILKTLKELYLGYSNAYEGGIPEELGFIQSLQLLDLASCNLSGKIPPTLGKLSNLNTLFLQMNNLSGTIPPELSSMISLMSLDLSINDLTGEIPETFSQLKNLTLISFFQNKLRGSIPEFVGELPNLETFQIWENNFSYVLPSNLGQNGKFKFFDVTKNHLTGLIPKDLCKGGRLQTFIFTDNFFYGPIPKEIGNCKSLLKFRVADNFLDGSIPAGIFNLPSVSVMEFDNNRFNGELPSEISGNSVWILTLSNNMLTGTIPSGLKNLKSLQTLSLDANQFVGEIPREVFELPMLMKINVSGNNLTGQIPTTLTRCVSLTAIDLSRNMVIGEVPKGIKKLKDLSILNVSRNNISGPIPDEIRFMTSLTTLDLSNNNFIGRIPTGGQFLVFNDRSFYGNPNLCSSHQPSCPSLVYQNDNVHKTQSSNSTKIIIIVITLSTALLLVFVTIYMMRKRKIHKSMKWKLTAFQKLEFKAEEVVECLKEENIIGKGGAGIVYRGSMGNGTDVAIKRLVGQGSGRNDYGFKAEIQTLGRIRHRNIMRLLGYVSNKDTNLLLYEYMSNGSLGEWLHGAKGGHLTWEMRYRIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDGEFEAHVADFGLAKFLHDQGGSQSMSFIVGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWIKKRETEICEPSDAASVLAVVDPRMSQYPLTSVIHMFNIAIMCVREMGPARPTMREVVHMLTNPQIHNKLSPNNMHVYN 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0128 983 Gene3D Ribonuclease Inhibitor 227 347 IPR032675 -
Lal2g0128 983 Gene3D Ribonuclease Inhibitor 140 226 IPR032675 -
Lal2g0128 983 Pfam Leucine rich repeat 479 536 IPR001611 GO:0005515
Lal2g0128 983 Gene3D Ribonuclease Inhibitor 348 621 IPR032675 -
Lal2g0128 983 Gene3D Ribonuclease Inhibitor 25 139 IPR032675 -
Lal2g0128 983 SMART serkin_6 690 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0128 983 Gene3D Transferase(Phosphotransferase) domain 1 767 980 - -
Lal2g0128 983 SMART LRR_typ_2 189 213 IPR003591 -
Lal2g0128 983 SMART LRR_typ_2 116 140 IPR003591 -
Lal2g0128 983 SMART LRR_typ_2 477 501 IPR003591 -
Lal2g0128 983 SMART LRR_typ_2 573 596 IPR003591 -
Lal2g0128 983 SMART LRR_typ_2 262 286 IPR003591 -
Lal2g0128 983 SMART LRR_typ_2 334 358 IPR003591 -
Lal2g0128 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Lal2g0128 983 SUPERFAMILY L domain-like 334 627 - -
Lal2g0128 983 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Lal2g0128 983 SUPERFAMILY Protein kinase-like (PK-like) 680 965 IPR011009 -
Lal2g0128 983 Pfam Protein tyrosine and serine/threonine kinase 691 965 IPR001245 GO:0004672|GO:0006468
Lal2g0128 983 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 5 972 - -
Lal2g0128 983 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Lal2g0128 983 ProSiteProfiles Protein kinase domain profile. 690 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g0128 983 PANTHER UNNAMED PRODUCT 5 972 - -
Lal2g0128 983 Pfam Leucine Rich Repeat 575 591 IPR001611 GO:0005515
Lal2g0128 983 Pfam Leucine Rich Repeat 240 262 IPR001611 GO:0005515
Lal2g0128 983 SUPERFAMILY RNI-like 73 396 - -
Lal2g0128 983 Coils Coil 982 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0128 Lal-Chr2 783247 786198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0128 19 968 Receptor kinase-like Gene Family AT1G75820 62.461 0.0 1227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal2g0128 PK_Tyr_Ser-Thr 9.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0128 K00924 - gmx:732625 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0206 1 1231951 1235661 Lal2g0128 2 783247 786198 LSH