Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0125 ATGGGAGAGTTAACTCATAGAGGATGTTGCCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTTCTTCAACTCATTATTCCCATCGAATCTGCTCATCTCACCGTCTCTTACCTCGGCGACCTTGGCCTCCTTCAGTTCAAAGATCTTAATACAGACAAGAGCCCTTTTCAACGGACTTATGCTACTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTGCGTTTTTTCAAGGAGCAAATGTTGAAGGCAGATGTTTTACCAGTACATTCTACAACAGTGGTTGATGTGAACATTGATGATCTTGAGGTAAAACTTGCGGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGCGAAAAGTTGCAGCGGTCTTACAATGAACTTGTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGTGAGTTTTTCCACACTGCTCAAAGCCATGCCATAGAGCAGCAGAGAGAAAATGAATCACGCCAACTGAGTGGTGACTCTATTGAAACACCTTTATTGCAAGACCAAGAGTTGCTAGGTGATTCATCGAAGCAAGTTAAATTGGGGTTTTTAGCTGGTCTTGTTCCCAGGGAAAAGTCCATGGCATTTGAGAGAATTTTATTTCGTGCTACCAGAGGCAATGTGTTTTTGAGACAAGTTGTCGTTGAGGATCCTGTCATAGACCCTGTTTCAGGAGAAAAGACAGAAAAAAATGTGTTTGTGGTCTTCTATGCTGCTGAAAAAGCGAAATCCAAGATTCTGAAAATATGTGATGCCTTTGGTGCTAATCGCTACCCTTTTGCAGAGGAAGTTGGAAAACAAACTCAAATGATTAAAGAGGTTTCCGGAAGACTTTTAGAATTGAAGACAACTATAGATGCTGGACTGCTGCATCGGGGTAACTTGCTACAGACTATTGGTGCTCAATTTGAGCAATGGAATCTTTTGGTGAGGAATGAGAAATCTATTTACCATACCCTGAACATGCTAAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAAGGGTGGAGTCCTGTTTTTGCAACAAAGCAGATCCAGGATGCATTACAGCGGGCAGCAACTGACTCTAACTCTCAAGTTAGTGCCATTATGCAAGTTCTGCATTCTAGGGAGTTGCCACCTACATATTTTCGCACAAACAAAGTTACTTCTTCATTTCAAGGAATTATTGATTCATATGGGGTTGCAAGGTATCAGGAGGCAAATCCTACTGTGTATACTGTAGTTACCTTTCCATTTCTTTTTGCTGTAATGTTTGGTGACTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATTAGGGAGAAGAAACTTTCTAGCAAGAAGCTTGATGACATCACAGAGATGACTTTTGGAGGACGTTATGTTATTTTTATGATGGCACTCTTCTCAATCTACACTGGTTTGATCTATAATGAGTTCTTCTCTATCCCATTTGAAATCTTTGGTCCTTCTGCATATGAATGCCGTGATATATCTTGCAAGGAAGCTACAACAGTGGGCCTGATAAAAGCGCGTCGTACTTATCCATTTGGTGTGGACCCTGTATGGCGTGGTTCACGAAGTGAATTACCATTCCTAAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGGGTTGCACAAATGAACCTTGGAATTGTAATGAGCTTTTTCAATGCTATATTCTTTAAGAACAGGGTAAATGTATGGTTTCAATTTATTCCCCAGATAATATTTCTCAACAGTCTATTTGGCTACCTGTCCCTTCTTATTATTGTGAAGTGGTGCACTGGTTCTCAAGCTGATTTGTATCATATATTGATCTACATGTTCCTGAGCCCGACAGATGATTTGGGTGAAAACCAACTCTTTGCTGGTCAGAGAAATCTGCAGATTACGCTTTTGCTTCTGGCCGCTATCTCTGTGCCTTGGATGCTGATCCCAAAACCTTTTATCTTGAAGAAGCAACATGAGAATAGGCACGGAGTTGATTCCTATGCACCACTTCAAACGACAGAGGAGAGCTTGCAAGTAGAGTCAAATCACGATCCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTCATACACACCATAGAGTTTGTCCTTGGAGCAGTTTCTAATACAGCTTCTTACCTTCGTCTATGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAACTGTATTCTACGAGAAGGTTCTGCTAATGGCATGGGGGTACCATAACGTGATTATCCTGATAGTTGGTCTCATTGTCTTCATATTCGCTACGGTTGGAGTGTTGCTTGTGATGGAAACTCTGAGTGCCTTCTTACATGCTTTACGTCTTCACTGGGTGGAATTCCAGAACAAGTTTTATGAGGGAGATGGTTACAAGTTCCACCCTTTCTCATTCTCATTGATAGAAGATGAGGATGAGTGA 2460 0.4138 MGELTHRGCCPPMDLFRSEPMQLLQLIIPIESAHLTVSYLGDLGLLQFKDLNTDKSPFQRTYATQIKRCGEMARKLRFFKEQMLKADVLPVHSTTVVDVNIDDLEVKLAEIESELTEMNANGEKLQRSYNELVEYKLVLQKAGEFFHTAQSHAIEQQRENESRQLSGDSIETPLLQDQELLGDSSKQVKLGFLAGLVPREKSMAFERILFRATRGNVFLRQVVVEDPVIDPVSGEKTEKNVFVVFYAAEKAKSKILKICDAFGANRYPFAEEVGKQTQMIKEVSGRLLELKTTIDAGLLHRGNLLQTIGAQFEQWNLLVRNEKSIYHTLNMLSLDVTKKCLVAEGWSPVFATKQIQDALQRAATDSNSQVSAIMQVLHSRELPPTYFRTNKVTSSFQGIIDSYGVARYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSKKLDDITEMTFGGRYVIFMMALFSIYTGLIYNEFFSIPFEIFGPSAYECRDISCKEATTVGLIKARRTYPFGVDPVWRGSRSELPFLNSLKMKMSILLGVAQMNLGIVMSFFNAIFFKNRVNVWFQFIPQIIFLNSLFGYLSLLIIVKWCTGSQADLYHILIYMFLSPTDDLGENQLFAGQRNLQITLLLLAAISVPWMLIPKPFILKKQHENRHGVDSYAPLQTTEESLQVESNHDPHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLMAWGYHNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSLIEDEDE 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0125 819 PIRSF ATP6V0A1 11 819 IPR026028 GO:0000220|GO:0046961
Lal2g0125 819 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lal2g0125 819 Coils Coil 101 128 - -
Lal2g0125 819 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 819 - -
Lal2g0125 819 PANTHER VACUOLAR PROTON ATPASES 4 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0125 Lal-Chr2 761597 770881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0125 13 819 Primary Pumps ATPases(2) AT4G39080 76.914 0.0 1295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0125 K02154 - gmx:100810062 1453.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0125 2 761597 770881 Lal2g0125 2 761597 770881 ECH
Lal2g0125 2 761597 770881 Lal9g0142 9 909541 917953 LSH