Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0124 ATGGTTAGTGTAATAGTCAATCTTCCAACGACTATCATTTTCCCTAATTTGAATCCTTCTTATACTATACCTTCAGAGCCCACAAACCCAAACCCAAATCAATTCTGGCGGGAAAATCATAACTACTCTCTCTCTCACACACACACACACAATAGCAGCAAAACCATGAATTCTGATTCTCCTCCCACGAATTTCAACAGCGATCCTTTATCCCCTGATGATTCCCTTTCGAGCCCTATCGGCAACACGTACTCATCTCCCGGAGCTTCTTCTCGCCGGAGACATCGTCGTCCCCGCTCTGATGCCGCCACACCAACTCCATCGCGCTCTAGGCAAGGAGGTGCCGCCACTCCCACCTCTACTGATGAAATTCCGCCGTCTTCTGATGGCGGCGACGGTTTGGACATGGGCGATTCTAGACCTACTTATGTCTGGGGCACAAACATAAGCGTGGAAGAAGTGAACGATGCGATCCAAAGGTTTCTGAGGGATTTCAGAGAAGCTTCTTCAAAGAATGATGTTGATGAATTGCATTTGCACACTGAAGGGAAGTATGAGAAAATTATCAAACATGTGATTGAGACTGATGGTGAGTCTTTGGATGTGGATGCACATGATGTGTTTGATCATGATCCTGATTTGTATACCAAGATGGTCAGGTACCCGCTCGAAGTGCTTGCCATTTTTGATTTGGTTTTGATGAATATGGTTAGCCGATTGAACCCTATGTCTGAGAAGCACATTCAGACTCAGATTTTCAACCTTAAAACTTCAACTTCAATGCGAAATTTGAACCCATCCGATATTGAGAGGATGATCTCATTAAAGGGAATGATTATTCGGTGTAGCTCAATCATACCAGAAATAAGGGAAGCTATATTTAGGTGTATTGTGTGTGGATACTGCTCTGACCCTGTTGCTGTAGAGAGAGGGCGAATAACGGAGCCCACCATATGCTTGAGGGAAGAGTGTATGTCCAGGAACTCCATGACACTGGTGCACAACCGATGCAGGTTTACTGATAAGCAAATTGTGAGGCTACAGGAGACACCTGATGAGATACCTGAAGGAGGAACACCTCACACAGTGAGCCTGCTGATGCATGACAAGCTGGTGGATACTGGAAAGCCAGGTGACAGAATTGAGGTGACTGGTATTTATAGGGCTATGAGTGTGAGGGTTGGGCCAACTCAGAGAAGTGTTAAATCTTTATTCAAGACTTATATTGATTGTCTCCACATAAAGAAGAATGATAAGTCTAGGATGCTGATAGATGATGCTATGGAGGTTGATAATGGCATGGGCAGAAATTCAGAAGAAGTTTTCTTTGACGAAAAAATGGTGGCTCAATTGAAGGAGCTCTCAAGACAGCCAGATATATATGAAAGACTGACAAGGTCATTGGCGCCAAACATCTGGGAGCTAGATGATGTGAAGAAAGGTCTTCTTTGTCAGCTTTTTGGTGGAAATGCTTTGTCTTTGACATCTGGTGCTAGCTTTCGAGGTGATATAAATATTCTTCTTGTTGGTGATCCTGGGACGAGCAAGTCCCAGCTACTTCAATACATTCACAAACTATCCCCACGTGGCATTTACACCAGTGGAAGGGGGAGCTCTGCTGTTGGATTGACTGCTTACGTGACCAAGGACCCTGAAACAGGCGAAACTGTTCTAGAGAGTGGTGCACTAGTTTTGAGTGACCGAGGTATCTGCTGTATAGATGAATTTGACAAAATGTCTGACAATGCAAGGAGCATGTTACATGAGGTTGATTACATTCTTTGTCTAGCTGTGAATAGGCAGATTAAAGTACAATGGCCTCACTCATATTTGTTAATGAAGTATTCCTACAGTACTATCTATCTTTTTTATCCTCCAGACTTGGTGATGGAACAACAAACTGTTTCAATAGCAAAGGCAGGCATTATTGCATCTCTCAATGCTAGAACTTCGGTGTTGGCTTGTGCAAATCCAAGTGGGTCTCGGTATAATCCTCGCTTGTCAGTCATTGACAACATACACCTTCCTCCCACACTTCTGTCCAGGTTCGATTTAATTTACTTAATTCTTGACAAGGCTGATGAGCAGACTGACCGACGCCTTGCCAAACATATTGTTTCCCTTCACTTTGAGAATCCTGAGAGTACGGAGCAAGATGTGTTGGACCTTTCCACATTAACTGATTATGTAAGCTATGCTAGAAAGAATATACACCCACAACTGTCTGATGAAGCTGCTGAAGAATTGATTAGAGGTTACGTGGAAATAAGACAAAGAGGAAATTTTCCTGGGAGCAGCAAAAAGGTGATAACAGCAACACCAAGGCAGATTGAGAGTCTTATACGTCTCAGTGAAGCCTTGGCTCGGATTCGCTTCTCAGAATGGGTTGAAAAGCATGATGTTATTGAAGCATTCCGGCTTCTGAATGTTGCAATGCAGCAGTCTGCAACTGATCACTCTACTGGAACTATTGACATGGATCTTATTACTACTGGAGTTTCGGCTAGTGAAAGGATGAGAAGGGAGAGTCTGCTGCAATCAATCCGCAACATAATCATGGAGAAGATGCAAATTGGGGGACCATCTATGCGGTTATTGGAGTTATTAGAAGAATTGAAGAACCAGAACAGTGGCAGTGAAGTTCATCTTACTGATCTAAGGAGCGCAATTACTACTCTTTCTAGCGAGGGATTTGTTAATTTGCATGGTGACAGCGTGAAAAGATGTTGA 2730 0.4341 MVSVIVNLPTTIIFPNLNPSYTIPSEPTNPNPNQFWRENHNYSLSHTHTHNSSKTMNSDSPPTNFNSDPLSPDDSLSSPIGNTYSSPGASSRRRHRRPRSDAATPTPSRSRQGGAATPTSTDEIPPSSDGGDGLDMGDSRPTYVWGTNISVEEVNDAIQRFLRDFREASSKNDVDELHLHTEGKYEKIIKHVIETDGESLDVDAHDVFDHDPDLYTKMVRYPLEVLAIFDLVLMNMVSRLNPMSEKHIQTQIFNLKTSTSMRNLNPSDIERMISLKGMIIRCSSIIPEIREAIFRCIVCGYCSDPVAVERGRITEPTICLREECMSRNSMTLVHNRCRFTDKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDTGKPGDRIEVTGIYRAMSVRVGPTQRSVKSLFKTYIDCLHIKKNDKSRMLIDDAMEVDNGMGRNSEEVFFDEKMVAQLKELSRQPDIYERLTRSLAPNIWELDDVKKGLLCQLFGGNALSLTSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVDYILCLAVNRQIKVQWPHSYLLMKYSYSTIYLFYPPDLVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPESTEQDVLDLSTLTDYVSYARKNIHPQLSDEAAEELIRGYVEIRQRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWVEKHDVIEAFRLLNVAMQQSATDHSTGTIDMDLITTGVSASERMRRESLLQSIRNIIMEKMQIGGPSMRLLELLEELKNQNSGSEVHLTDLRSAITTLSSEGFVNLHGDSVKRC 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0124 909 CDD MCM4 463 811 - -
Lal2g0124 909 MobiDBLite consensus disorder prediction 44 141 - -
Lal2g0124 909 MobiDBLite consensus disorder prediction 103 126 - -
Lal2g0124 909 Gene3D - 261 400 IPR012340 -
Lal2g0124 909 ProSitePatterns MCM family signature. 569 577 IPR018525 GO:0003677|GO:0005524|GO:0006260
Lal2g0124 909 Gene3D - 627 817 IPR027417 -
Lal2g0124 909 Pfam MCM N-terminal domain 157 257 IPR027925 -
Lal2g0124 909 Gene3D - 288 340 - -
Lal2g0124 909 Gene3D - 438 592 IPR027417 -
Lal2g0124 909 SUPERFAMILY Nucleic acid-binding proteins 180 411 IPR012340 -
Lal2g0124 909 Gene3D - 148 255 - -
Lal2g0124 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 590 IPR027417 -
Lal2g0124 909 PANTHER DNA REPLICATION LICENSING FACTOR MCM4 115 908 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lal2g0124 909 Pfam MCM P-loop domain 629 709 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal2g0124 909 Pfam MCM P-loop domain 449 590 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal2g0124 909 Pfam MCM AAA-lid domain 725 811 IPR041562 -
Lal2g0124 909 Gene3D - 818 900 IPR036388 -
Lal2g0124 909 Pfam MCM OB domain 261 390 IPR033762 -
Lal2g0124 909 PRINTS Mini-chromosome maintenance (MCM) protein family signature 501 516 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal2g0124 909 PRINTS Mini-chromosome maintenance (MCM) protein family signature 628 641 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal2g0124 909 PRINTS Mini-chromosome maintenance (MCM) protein family signature 652 664 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal2g0124 909 PRINTS Mini-chromosome maintenance (MCM) protein family signature 679 687 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal2g0124 909 MobiDBLite consensus disorder prediction 44 89 - -
Lal2g0124 909 SMART mcm 257 813 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lal2g0124 909 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 283 296 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lal2g0124 909 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 334 346 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lal2g0124 909 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 661 678 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lal2g0124 909 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 813 822 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Lal2g0124 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 629 825 IPR027417 -
Lal2g0124 909 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 115 908 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lal2g0124 909 ProSiteProfiles MCM family domain profile. 460 705 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0124 Lal-Chr2 753796 759715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0124 56 908 Core DNA Replication Machinery Family AT2G16440 69.854 0.0 1216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0124 K02212 - gmx:100782586 1321.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0124 2 753796 759715 Lal2g0124 2 753796 759715 ECH
Lal2g0124 2 753796 759715 Lal9g0141 9 902731 908192 LSH