Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0112 ATGGCCCTCTCTACTCTCTCCTCATCTTCTTCCACTCTCTCTCTCAATACTTCCCTCTTCAACAAACCCTTAAACCCTAAATCCTCCTCATTCACCCTCCCCCGCCCCCGCCACAAGACTCCATTCCTCGCCGCCGCCAACAACCCCATCTCCGATATCGTATTGTCCGATACCCCTTATCCCCAATCCGAATCCGAAACCCTTTACGATGATAAGCCACGCGAGGAGTGCGGTGTGGTTGGCATCTACGGCGACCCTGAGGCCTCTCGTCTCTGCTACCTCGCCCTCCACGCGCTCCAACACCGTGGCCAAGAAGGCGCTGGCATCGTCGCCGTCAATAACAACGTCCTTCAATCCATTACTGGGGTTGGGTTAGTTTCCGATGTTTTTAACGAAACCAAGCTTGACCAGTTACCTGGTAGTTTAGCCATCGGTCATGTTCGTTACTCAACTGCTGGCCAATCAATGCTTAAAAATGTTCAACCTTTTGTTGCTGGTTACCGGTTTGGTTCTGTTGGTGTTGCCCACAATGGCAATTTGGTAAATTACGGTACTTTAAGGGCAGAGCTTGAAGAGTGTGGTTCAATTTTTAATACCACCTCTGATACTGAGGTTGTGCTTCATCTGATTGCTACCTCAAAGCAAAGACCTTTTATTTTGAGGATTGTTGATGCTTGTGAGAAAATTGAAGGTGCTTATTCTATTGTCTTTGTTACTGAGGATAAGCTTGTTGCTGTGAGGGACCCACATGGTTTTAGACCTTTGGTCATGGGGAGAAGGGCTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCACTTGATTTGATTGAAGCCACTTACGAGAGGGAAGTCTTCCCTGGTGAGGTTATTGTTGTTGATAAAGAAGGTGTTCAATCACTTTGTTTAATGTCTCATCCGCAACCAAAGCAGTGTATATTTGAGCATATTTACTTTGCTTTGCCTAATTCTGTTGTTTTCGGGAGGTCCGTCTATGATTCCCGAAGGCAATTCGGGGAAATTTTGGCTACCGAGAGCCCTGTTGATTGTGATGTTGTGATTGCTGTGCCTGATTCTGGTGTCGTTGCTGCACTCGGTTATGCTGCGAAAGCTGGTGTTCCTTTTCAGCAGGGGCTAATTAGATCACACTATGTTGGAAGGACTTTTATTGAGCCATCACAGAAGATTAGGGACTTTGGTGTGAAGCTGAAGTTGTCACCGGTTCGTGCGGTTCTTGAAGGTAAGAGGGTTGTGGTTGTGGATGATTCAATTGTGAGGGGAACTACTTCATCAAAGATAGTGAGGTTGCTGAAGGAGGCTGGTGCTAAAGAAGTTCATATGAGGATTGCAAGTCCACCAATAATTGGTTCATGTTATTATGGGGTGGACACACCGAGCTCTGAGGAGTTGATTTCTAATAGGATGAATGTGGAAGAGATAAGAAAGTTTATTGGATCAGATTCACTTGCTTTTCTTCCATTTGATAGCTTGACGGGTTTGCTGGGGAATGAGTCTCCTAATTTCTGTTATGCTTGTTTCTCCGGGAATTACCCTATTGAGCCTAAGGAGCTTAAAGTTAAGAGGGTTGGTGACTTTGTGGATGATGGCTTAAATGGGAGTTTGGAATCAATTGATGGAGGCTGGGTTCAAGCAAACAGAAATATAAAAGAGGTAAAGGTTGGTGGTACTTAG 1692 0.4539 MALSTLSSSSSTLSLNTSLFNKPLNPKSSSFTLPRPRHKTPFLAAANNPISDIVLSDTPYPQSESETLYDDKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVNNNVLQSITGVGLVSDVFNETKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYGTLRAELEECGSIFNTTSDTEVVLHLIATSKQRPFILRIVDACEKIEGAYSIVFVTEDKLVAVRDPHGFRPLVMGRRANGAVVFASETCALDLIEATYEREVFPGEVIVVDKEGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYDSRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMNVEEIRKFIGSDSLAFLPFDSLTGLLGNESPNFCYACFSGNYPIEPKELKVKRVGDFVDDGLNGSLESIDGGWVQANRNIKEVKVGGT 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0112 563 CDD GPATase_N 77 327 IPR035584 -
Lal2g0112 563 Hamap Amidophosphoribosyltransferase [purF]. 76 517 IPR005854 GO:0004044|GO:0009113
Lal2g0112 563 Pfam Phosphoribosyl transferase domain 351 446 IPR000836 -
Lal2g0112 563 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 57 549 - -
Lal2g0112 563 Pfam Glutamine amidotransferase domain 155 274 IPR017932 -
Lal2g0112 563 TIGRFAM purF: amidophosphoribosyltransferase 77 518 IPR005854 GO:0004044|GO:0009113
Lal2g0112 563 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 77 296 IPR017932 -
Lal2g0112 563 Gene3D - 336 500 IPR029057 -
Lal2g0112 563 CDD PRTases_typeI 339 450 IPR000836 -
Lal2g0112 563 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 57 549 - -
Lal2g0112 563 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 77 518 IPR029055 -
Lal2g0112 563 SUPERFAMILY PRTase-like 312 522 IPR029057 -
Lal2g0112 563 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 77 300 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0112 Lal-Chr2 680797 682488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0112 69 550 PRT Gene Family AT4G34740 84.472 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0112 K00764 - gmx:100801720 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0112 2 680797 682488 Lal2g0112 2 680797 682488 ECH